Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SCN1BQ07699 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 AL359263.1-201ENST00000441188 2796 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
SCN1BQ07699 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.75□□□□□ -1.49
SCN1BQ07699 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.75□□□□□ -1.49
SCN1BQ07699 RNA5SP114-201ENST00000363780 113 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 AL049697.3-201ENST00000406493 982 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 RN7SKP38-201ENST00000410782 309 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 RN7SKP268-201ENST00000411107 316 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 RN7SKP17-201ENST00000411242 351 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.75□□□□□ -1.49
SCN1BQ07699 AL663061.1-201ENST00000416625 580 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 AC244453.4-201ENST00000419150 388 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 AL359633.1-201ENST00000421403 310 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 GRPEL2P2-201ENST00000421856 670 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.75□□□□□ -1.49
SCN1BQ07699 AC019185.3-201ENST00000438805 323 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.75□□□□□ -1.49
SCN1BQ07699 BX005266.3-201ENST00000443013 1075 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 AC079922.1-201ENST00000443291 359 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC5.75□□□□□ -1.49
SCN1BQ07699 RPL31P53-201ENST00000457065 348 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC5.75□□□□□ -1.49
SCN1BQ07699 AC083806.1-201ENST00000468934 316 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.75□□□□□ -1.49
SCN1BQ07699 RPS26P6-201ENST00000475156 348 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.75□□□□□ -1.49
SCN1BQ07699 DCAF13P2-201ENST00000514188 555 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.75□□□□□ -1.49
SCN1BQ07699 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SCN1BQ07699 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.75□□□□□ -1.49
SCN1BQ07699 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 MTATP6P25-201ENST00000574491 261 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC5.75□□□□□ -1.49
SCN1BQ07699 AC092032.1-201ENST00000603090 165 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.75□□□□□ -1.49
SCN1BQ07699 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.75□□□□□ -1.49
SCN1BQ07699 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SCN1BQ07699 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.75□□□□□ -1.49
SCN1BQ07699 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.75□□□□□ -1.49
SCN1BQ07699 MIR665-201ENST00000635949 72 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SCN1BQ07699 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SCN1BQ07699 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.75□□□□□ -1.49
SCN1BQ07699 OR10AB1P-202ENST00000641219 1686 ntBASIC5.75□□□□□ -1.49
SCN1BQ07699 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.75□□□□□ -1.49
SCN1BQ07699 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.75□□□□□ -1.49
SCN1BQ07699 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCN1BQ07699 GOT2P1-201ENST00000440922 1309 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SCN1BQ07699 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 MIR365B-201ENST00000362317 111 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.74□□□□□ -1.49
SCN1BQ07699 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.74□□□□□ -1.49
SCN1BQ07699 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 MRPS21P2-201ENST00000424704 264 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.74□□□□□ -1.49
SCN1BQ07699 SNRPEP5-201ENST00000425442 278 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SCN1BQ07699 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.74□□□□□ -1.49
SCN1BQ07699 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 Z85994.2-201ENST00000434327 452 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.74□□□□□ -1.49
SCN1BQ07699 GTF2IP14-201ENST00000441415 586 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 OR13K1P-201ENST00000444577 975 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 RPL5P10-201ENST00000445207 894 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 RAD1P2-201ENST00000446414 663 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 VN1R38P-201ENST00000450265 887 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 GOT2P2-201ENST00000450663 1251 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 RBMY2TP-201ENST00000451162 947 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.74□□□□□ -1.49
SCN1BQ07699 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SCN1BQ07699 AC126615.1-201ENST00000470084 630 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCN1BQ07699 SSU72P6-201ENST00000532644 488 ntBASIC5.74□□□□□ -1.49
SCN1BQ07699 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.74□□□□□ -1.49
SCN1BQ07699 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.74□□□□□ -1.49
SCN1BQ07699 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.74□□□□□ -1.49
SCN1BQ07699 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.74□□□□□ -1.49
SCN1BQ07699 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms