Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.33□□□□□ -1.24
GABPAQ06546 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.33□□□□□ -1.24
GABPAQ06546 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.33□□□□□ -1.24
GABPAQ06546 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.33□□□□□ -1.24
GABPAQ06546 MIR3189-201ENST00000578735 73 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.33□□□□□ -1.24
GABPAQ06546 RFPL4AP6-201ENST00000616792 846 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 FO681491.1-202ENST00000623392 737 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.33□□□□□ -1.24
GABPAQ06546 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.33□□□□□ -1.24
GABPAQ06546 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
GABPAQ06546 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.33□□□□□ -1.24
GABPAQ06546 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.33□□□□□ -1.24
GABPAQ06546 AL157831.2-201ENST00000564681 3095 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.33□□□□□ -1.24
GABPAQ06546 TNPO1P2-201ENST00000426249 2665 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
GABPAQ06546 RBMY1HP-201ENST00000382759 1389 ntBASIC7.33□□□□□ -1.24
GABPAQ06546 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
GABPAQ06546 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
GABPAQ06546 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
GABPAQ06546 AC024651.2-201ENST00000562480 2098 ntBASIC7.32□□□□□ -1.24
GABPAQ06546 BIN2P1-201ENST00000504996 1530 ntBASIC7.32□□□□□ -1.24
GABPAQ06546 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
GABPAQ06546 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
GABPAQ06546 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
GABPAQ06546 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.32□□□□□ -1.24
GABPAQ06546 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
GABPAQ06546 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.32□□□□□ -1.24
GABPAQ06546 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.32□□□□□ -1.24
GABPAQ06546 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.32□□□□□ -1.24
GABPAQ06546 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
GABPAQ06546 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
GABPAQ06546 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
GABPAQ06546 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
GABPAQ06546 RNU1-134P-201ENST00000362935 165 ntBASIC7.32□□□□□ -1.24
GABPAQ06546 SNORA43.1-201ENST00000364863 140 ntBASIC7.32□□□□□ -1.24
GABPAQ06546 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
GABPAQ06546 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.32□□□□□ -1.24
GABPAQ06546 ATP5LP2-201ENST00000440646 311 ntBASIC7.32□□□□□ -1.24
GABPAQ06546 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.32□□□□□ -1.24
GABPAQ06546 AC016908.1-201ENST00000442571 1219 ntBASIC7.32□□□□□ -1.24
GABPAQ06546 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
GABPAQ06546 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.32□□□□□ -1.24
GABPAQ06546 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC7.32□□□□□ -1.24
GABPAQ06546 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.32□□□□□ -1.24
GABPAQ06546 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.32□□□□□ -1.24
GABPAQ06546 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.32□□□□□ -1.24
GABPAQ06546 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.32□□□□□ -1.24
GABPAQ06546 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.32□□□□□ -1.24
GABPAQ06546 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.32□□□□□ -1.24
GABPAQ06546 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.32□□□□□ -1.24
GABPAQ06546 AC027243.2-201ENST00000602530 724 ntBASIC7.32□□□□□ -1.24
GABPAQ06546 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC7.32□□□□□ -1.24
GABPAQ06546 AC092681.3-201ENST00000609463 678 ntBASIC7.32□□□□□ -1.24
GABPAQ06546 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.32□□□□□ -1.24
GABPAQ06546 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
GABPAQ06546 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
GABPAQ06546 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
GABPAQ06546 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.32□□□□□ -1.24
GABPAQ06546 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.32□□□□□ -1.24
GABPAQ06546 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.32□□□□□ -1.24
GABPAQ06546 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
GABPAQ06546 AC007406.5-201ENST00000570140 3170 ntBASIC7.32□□□□□ -1.24
GABPAQ06546 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.32□□□□□ -1.24
GABPAQ06546 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
GABPAQ06546 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.32□□□□□ -1.24
GABPAQ06546 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
GABPAQ06546 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
GABPAQ06546 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
GABPAQ06546 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
GABPAQ06546 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.31□□□□□ -1.24
GABPAQ06546 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
GABPAQ06546 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
GABPAQ06546 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
GABPAQ06546 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
GABPAQ06546 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
GABPAQ06546 RNA5SP477-201ENST00000362639 119 ntBASIC7.31□□□□□ -1.24
GABPAQ06546 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
GABPAQ06546 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
GABPAQ06546 AC245096.1-201ENST00000413104 546 ntBASIC7.31□□□□□ -1.24
GABPAQ06546 UBE2V1P14-201ENST00000415815 558 ntBASIC7.31□□□□□ -1.24
GABPAQ06546 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.31□□□□□ -1.24
GABPAQ06546 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
GABPAQ06546 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.31□□□□□ -1.24
GABPAQ06546 RPS29P14-201ENST00000431518 171 ntBASIC7.31□□□□□ -1.24
GABPAQ06546 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.31□□□□□ -1.24
GABPAQ06546 AC009237.1-201ENST00000442127 744 ntBASIC7.31□□□□□ -1.24
GABPAQ06546 SEPT14P12-201ENST00000442280 560 ntBASIC7.31□□□□□ -1.24
GABPAQ06546 AC084754.1-201ENST00000463466 464 ntBASIC7.31□□□□□ -1.24
GABPAQ06546 RN7SKP238-201ENST00000516483 249 ntBASIC7.31□□□□□ -1.24
GABPAQ06546 AC060775.1-201ENST00000518241 520 ntBASIC7.31□□□□□ -1.24
GABPAQ06546 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.31□□□□□ -1.24
GABPAQ06546 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
GABPAQ06546 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.31□□□□□ -1.24
GABPAQ06546 AP005119.1-201ENST00000580956 292 ntBASIC7.31□□□□□ -1.24
GABPAQ06546 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.31□□□□□ -1.24
GABPAQ06546 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.31□□□□□ -1.24
GABPAQ06546 AC008555.7-201ENST00000605008 583 ntBASIC7.31□□□□□ -1.24
GABPAQ06546 AL096712.1-201ENST00000614561 159 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms