Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3AP84243 LDHAP2-201ENST00000437325 985 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3AP84243 DNAJC19P5-201ENST00000443295 316 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 POU5F1P5-201ENST00000445059 658 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 AC007383.1-201ENST00000445875 636 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 MORF4-201ENST00000447135 971 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.66□□□□□ -1.5
H3F3AP84243 AC002075.1-201ENST00000457396 676 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.66□□□□□ -1.5
H3F3AP84243 RN7SL369P-201ENST00000477138 299 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 RN7SL326P-201ENST00000477493 296 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 RN7SL714P-201ENST00000487050 298 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3AP84243 HMGN1P16-201ENST00000508308 283 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 GUSBP9-201ENST00000510138 584 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.66□□□□□ -1.5
H3F3AP84243 AC116917.1-201ENST00000520558 305 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 AC016590.3-201ENST00000611171 753 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 AC012676.3-201ENST00000614983 479 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 MIR6811-201ENST00000620409 58 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 AL122023.1-201ENST00000622847 530 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3AP84243 AC010325.3-201ENST00000641084 394 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 OR7E91P-202ENST00000642062 1198 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.66□□□□□ -1.5
H3F3AP84243 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.66□□□□□ -1.5
H3F3AP84243 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
H3F3AP84243 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.66□□□□□ -1.5
H3F3AP84243 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.66□□□□□ -1.5
H3F3AP84243 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.5
H3F3AP84243 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
H3F3AP84243 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
H3F3AP84243 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
H3F3AP84243 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3AP84243 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.65□□□□□ -1.5
H3F3AP84243 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
H3F3AP84243 OFD1P17-201ENST00000437639 3018 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
H3F3AP84243 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.65□□□□□ -1.5
H3F3AP84243 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3AP84243 BIN2P1-201ENST00000504996 1530 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.65□□□□□ -1.5
H3F3AP84243 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
H3F3AP84243 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
H3F3AP84243 SNORA70.9-201ENST00000384370 135 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 PSMA6P1-201ENST00000400275 741 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 RN7SKP161-201ENST00000411110 305 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 UBE2V1P14-201ENST00000415815 558 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.65□□□□□ -1.5
H3F3AP84243 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.65□□□□□ -1.5
H3F3AP84243 AC245884.2-201ENST00000426257 404 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 BMP6P1-201ENST00000431230 679 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.65□□□□□ -1.5
H3F3AP84243 AC013403.1-201ENST00000436954 263 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.65□□□□□ -1.5
H3F3AP84243 SOCS5P1-201ENST00000440415 949 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 AL355355.1-201ENST00000442900 793 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.65□□□□□ -1.5
H3F3AP84243 AC098818.1-201ENST00000478593 252 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.65□□□□□ -1.5
H3F3AP84243 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.65□□□□□ -1.5
H3F3AP84243 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.65□□□□□ -1.5
H3F3AP84243 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.65□□□□□ -1.5
H3F3AP84243 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.65□□□□□ -1.5
H3F3AP84243 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3AP84243 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
H3F3AP84243 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.65□□□□□ -1.5
H3F3AP84243 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
H3F3AP84243 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3AP84243 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.65□□□□□ -1.5
H3F3AP84243 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.65□□□□□ -1.5
H3F3AP84243 AC011497.2-201ENST00000600255 639 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3AP84243 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.65□□□□□ -1.5
H3F3AP84243 MIR7159-201ENST00000620587 66 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.65□□□□□ -1.5
H3F3AP84243 AC022726.2-201ENST00000634673 547 ntBASIC5.65□□□□□ -1.5
H3F3AP84243 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
H3F3AP84243 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.65□□□□□ -1.51
H3F3AP84243 DOCK11P1-201ENST00000553480 5932 ntBASIC5.65□□□□□ -1.51
H3F3AP84243 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
H3F3AP84243 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
H3F3AP84243 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
H3F3AP84243 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
H3F3AP84243 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
H3F3AP84243 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.65□□□□□ -1.51
H3F3AP84243 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3AP84243 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
H3F3AP84243 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
H3F3AP84243 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3AP84243 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
H3F3AP84243 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms