Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.24□□□□□ -1.25
CCNA1P78396 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.24□□□□□ -1.25
CCNA1P78396 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.24□□□□□ -1.25
CCNA1P78396 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.24□□□□□ -1.25
CCNA1P78396 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.24□□□□□ -1.25
CCNA1P78396 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.24□□□□□ -1.25
CCNA1P78396 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.24□□□□□ -1.25
CCNA1P78396 AC010998.3-201ENST00000613871 631 ntBASIC7.24□□□□□ -1.25
CCNA1P78396 RFPL4AP6-201ENST00000616792 846 ntBASIC7.24□□□□□ -1.25
CCNA1P78396 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.24□□□□□ -1.25
CCNA1P78396 MIR7159-201ENST00000620587 66 ntBASIC7.24□□□□□ -1.25
CCNA1P78396 AC127024.6-201ENST00000621598 424 ntBASIC7.24□□□□□ -1.25
CCNA1P78396 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC7.24□□□□□ -1.25
CCNA1P78396 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC7.24□□□□□ -1.25
CCNA1P78396 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCNA1P78396 JPX-212ENST00000639185 9658 ntTSL 5 BASIC7.24□□□□□ -1.25
CCNA1P78396 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCNA1P78396 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CCNA1P78396 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.24□□□□□ -1.25
CCNA1P78396 AC011379.1-201ENST00000508713 3025 ntBASIC7.24□□□□□ -1.25
CCNA1P78396 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCNA1P78396 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCNA1P78396 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCNA1P78396 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCNA1P78396 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.24□□□□□ -1.25
CCNA1P78396 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCNA1P78396 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CCNA1P78396 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCNA1P78396 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCNA1P78396 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCNA1P78396 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.23□□□□□ -1.25
CCNA1P78396 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCNA1P78396 AC011455.2-201ENST00000599320 3336 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCNA1P78396 AC061975.7-201ENST00000592016 2692 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCNA1P78396 MIR323A-201ENST00000362199 86 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 RNU1-134P-201ENST00000362935 165 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CCNA1P78396 RNA5SP284-201ENST00000384547 118 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CCNA1P78396 AL023284.3-201ENST00000407767 334 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 RNA5SP178-201ENST00000410380 128 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.23□□□□□ -1.25
CCNA1P78396 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.23□□□□□ -1.25
CCNA1P78396 NPM1P36-201ENST00000415681 835 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.23□□□□□ -1.25
CCNA1P78396 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.23□□□□□ -1.25
CCNA1P78396 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.23□□□□□ -1.25
CCNA1P78396 AL139156.3-201ENST00000454802 394 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.23□□□□□ -1.25
CCNA1P78396 AC093719.1-201ENST00000480427 441 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.23□□□□□ -1.25
CCNA1P78396 PSMA2P2-201ENST00000504319 686 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.23□□□□□ -1.25
CCNA1P78396 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC7.23□□□□□ -1.25
CCNA1P78396 SNORD46.2-201ENST00000516021 102 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.23□□□□□ -1.25
CCNA1P78396 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.23□□□□□ -1.25
CCNA1P78396 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.23□□□□□ -1.25
CCNA1P78396 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.23□□□□□ -1.25
CCNA1P78396 AC090236.2-201ENST00000587933 1101 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CCNA1P78396 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.23□□□□□ -1.25
CCNA1P78396 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.23□□□□□ -1.25
CCNA1P78396 AL132640.3-201ENST00000630473 177 ntBASIC7.23□□□□□ -1.25
CCNA1P78396 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCNA1P78396 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCNA1P78396 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCNA1P78396 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCNA1P78396 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCNA1P78396 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.23□□□□□ -1.25
CCNA1P78396 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.23□□□□□ -1.25
CCNA1P78396 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.23□□□□□ -1.25
CCNA1P78396 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCNA1P78396 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.23□□□□□ -1.25
CCNA1P78396 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CCNA1P78396 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCNA1P78396 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCNA1P78396 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
CCNA1P78396 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
CCNA1P78396 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCNA1P78396 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCNA1P78396 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCNA1P78396 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCNA1P78396 CTAGE11P-201ENST00000451540 2353 ntBASIC7.22□□□□□ -1.25
CCNA1P78396 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCNA1P78396 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CCNA1P78396 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCNA1P78396 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CCNA1P78396 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC7.22□□□□□ -1.25
CCNA1P78396 RNA5SP477-201ENST00000362639 119 ntBASIC7.22□□□□□ -1.25
CCNA1P78396 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCNA1P78396 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.22□□□□□ -1.25
CCNA1P78396 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.22□□□□□ -1.25
CCNA1P78396 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.22□□□□□ -1.25
CCNA1P78396 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.22□□□□□ -1.25
CCNA1P78396 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.22□□□□□ -1.25
CCNA1P78396 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms