Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
RPL39P62891 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.31□□□□□ -1.72
RPL39P62891 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPL39P62891 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.3□□□□□ -1.72
RPL39P62891 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 AL161901.1-201ENST00000624954 3425 ntBASIC4.3□□□□□ -1.72
RPL39P62891 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 AC024587.1-201ENST00000505925 2157 ntBASIC4.3□□□□□ -1.72
RPL39P62891 SAMM50P1-201ENST00000455403 1399 ntBASIC4.3□□□□□ -1.72
RPL39P62891 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
RPL39P62891 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 AL137141.1-201ENST00000624622 4836 ntBASIC4.3□□□□□ -1.72
RPL39P62891 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 AC092451.3-201ENST00000625067 1343 ntBASIC4.3□□□□□ -1.72
RPL39P62891 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 AC027279.4-201ENST00000624371 2072 ntBASIC4.3□□□□□ -1.72
RPL39P62891 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
RPL39P62891 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 OR7A2P-201ENST00000304105 930 ntBASIC4.3□□□□□ -1.72
RPL39P62891 SOD1P1-201ENST00000407803 440 ntBASIC4.3□□□□□ -1.72
RPL39P62891 SNORA77.2-201ENST00000408571 112 ntBASIC4.3□□□□□ -1.72
RPL39P62891 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.3□□□□□ -1.72
RPL39P62891 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC4.3□□□□□ -1.72
RPL39P62891 RBMY2JP-201ENST00000425544 1059 ntBASIC4.3□□□□□ -1.72
RPL39P62891 AC009362.1-201ENST00000427253 406 ntBASIC4.3□□□□□ -1.72
RPL39P62891 AC083862.1-201ENST00000427378 1242 ntBASIC4.3□□□□□ -1.72
RPL39P62891 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.3□□□□□ -1.72
RPL39P62891 AC092106.2-201ENST00000436597 487 ntBASIC4.3□□□□□ -1.72
RPL39P62891 CHCHD4P5-201ENST00000436684 427 ntBASIC4.3□□□□□ -1.72
RPL39P62891 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC4.3□□□□□ -1.72
RPL39P62891 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.3□□□□□ -1.72
RPL39P62891 MORF4-201ENST00000447135 971 ntBASIC4.3□□□□□ -1.72
RPL39P62891 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC4.3□□□□□ -1.72
RPL39P62891 RPS4XP19-201ENST00000460237 736 ntBASIC4.3□□□□□ -1.72
RPL39P62891 RPL5P15-201ENST00000475870 897 ntBASIC4.3□□□□□ -1.72
RPL39P62891 PFN2-209ENST00000481275 560 ntTSL 4 BASIC4.3□□□□□ -1.72
RPL39P62891 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC4.3□□□□□ -1.72
RPL39P62891 ENPP7P3-201ENST00000509123 241 ntBASIC4.3□□□□□ -1.72
RPL39P62891 AC097460.2-201ENST00000511857 741 ntBASIC4.3□□□□□ -1.72
RPL39P62891 AC137549.1-201ENST00000514243 533 ntBASIC4.3□□□□□ -1.72
RPL39P62891 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC4.3□□□□□ -1.72
RPL39P62891 AC005519.1-201ENST00000554490 601 ntBASIC4.3□□□□□ -1.72
RPL39P62891 AC023968.1-201ENST00000560719 475 ntBASIC4.3□□□□□ -1.72
RPL39P62891 AC091932.1-201ENST00000569381 427 ntBASIC4.3□□□□□ -1.72
RPL39P62891 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC4.3□□□□□ -1.72
RPL39P62891 DYNLL1P1-201ENST00000595442 269 ntBASIC4.3□□□□□ -1.72
RPL39P62891 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC4.3□□□□□ -1.72
RPL39P62891 RPS11-205ENST00000599561 430 ntTSL 5 BASIC4.3□□□□□ -1.72
RPL39P62891 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.3□□□□□ -1.72
RPL39P62891 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.3□□□□□ -1.72
RPL39P62891 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.3□□□□□ -1.72
RPL39P62891 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC4.3□□□□□ -1.72
RPL39P62891 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC4.3□□□□□ -1.72
RPL39P62891 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RPL39P62891 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
RPL39P62891 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.3□□□□□ -1.72
RPL39P62891 AL136984.1-201ENST00000607611 1893 ntBASIC4.3□□□□□ -1.72
RPL39P62891 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RPL39P62891 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC4.3□□□□□ -1.72
RPL39P62891 AL592429.1-201ENST00000403909 1473 ntBASIC4.3□□□□□ -1.72
RPL39P62891 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
RPL39P62891 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.29□□□□□ -1.72
RPL39P62891 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
RPL39P62891 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.29□□□□□ -1.72
RPL39P62891 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.29□□□□□ -1.72
RPL39P62891 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.29□□□□□ -1.72
RPL39P62891 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RPL39P62891 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RPL39P62891 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RPL39P62891 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 AC109446.4-201ENST00000623235 2755 ntBASIC4.29□□□□□ -1.72
RPL39P62891 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RPL39P62891 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 U3.10-201ENST00000364459 214 ntBASIC4.29□□□□□ -1.72
RPL39P62891 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.29□□□□□ -1.72
RPL39P62891 EEF1GP6-201ENST00000402309 905 ntBASIC4.29□□□□□ -1.72
RPL39P62891 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC4.29□□□□□ -1.72
RPL39P62891 YWHAZP5-201ENST00000419975 730 ntBASIC4.29□□□□□ -1.72
RPL39P62891 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.29□□□□□ -1.72
RPL39P62891 GYG1P2-201ENST00000426437 1006 ntBASIC4.29□□□□□ -1.72
RPL39P62891 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 RPL3P11-201ENST00000434028 1146 ntBASIC4.29□□□□□ -1.72
RPL39P62891 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RPL39P62891 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.29□□□□□ -1.72
RPL39P62891 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.29□□□□□ -1.72
RPL39P62891 AL020997.1-201ENST00000446554 349 ntBASIC4.29□□□□□ -1.72
RPL39P62891 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms