Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC5.33□□□□□ -1.56
AP3S2P59780 LINC00869-202ENST00000430442 1065 ntTSL 5 BASIC5.33□□□□□ -1.56
AP3S2P59780 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC5.33□□□□□ -1.56
AP3S2P59780 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S2P59780 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S2P59780 RN7SL352P-201ENST00000466002 277 ntBASIC5.33□□□□□ -1.56
AP3S2P59780 AC090589.1-201ENST00000473109 362 ntBASIC5.33□□□□□ -1.56
AP3S2P59780 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC5.33□□□□□ -1.56
AP3S2P59780 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S2P59780 AC111000.6-201ENST00000514471 709 ntBASIC5.33□□□□□ -1.56
AP3S2P59780 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S2P59780 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC5.33□□□□□ -1.56
AP3S2P59780 CRADD-211ENST00000552983 839 ntTSL 5 BASIC5.33□□□□□ -1.56
AP3S2P59780 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S2P59780 PPIAP14-201ENST00000577627 496 ntBASIC5.33□□□□□ -1.56
AP3S2P59780 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.33□□□□□ -1.56
AP3S2P59780 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC5.33□□□□□ -1.56
AP3S2P59780 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.33□□□□□ -1.56
AP3S2P59780 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S2P59780 AC010487.1-201ENST00000594408 1172 ntBASIC5.33□□□□□ -1.56
AP3S2P59780 AC091133.5-201ENST00000603088 301 ntBASIC5.33□□□□□ -1.56
AP3S2P59780 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.33□□□□□ -1.56
AP3S2P59780 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.33□□□□□ -1.56
AP3S2P59780 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.33□□□□□ -1.56
AP3S2P59780 AC005355.2-201ENST00000625064 484 ntBASIC5.33□□□□□ -1.56
AP3S2P59780 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.33□□□□□ -1.56
AP3S2P59780 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
AP3S2P59780 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S2P59780 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.33□□□□□ -1.56
AP3S2P59780 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S2P59780 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S2P59780 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S2P59780 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.33□□□□□ -1.56
AP3S2P59780 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
AP3S2P59780 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
AP3S2P59780 AP005435.3-201ENST00000531260 3198 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 AC006484.1-201ENST00000435086 1884 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.32□□□□□ -1.56
AP3S2P59780 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
AP3S2P59780 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
AP3S2P59780 RNA5SP302-201ENST00000364896 100 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 PEX12P1-201ENST00000400284 1048 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.32□□□□□ -1.56
AP3S2P59780 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.32□□□□□ -1.56
AP3S2P59780 METTL15P3-201ENST00000415522 1221 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
AP3S2P59780 HLA-DQB1-AS1-201ENST00000419852 552 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.32□□□□□ -1.56
AP3S2P59780 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.32□□□□□ -1.56
AP3S2P59780 HSPA8P3-201ENST00000449300 780 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.32□□□□□ -1.56
AP3S2P59780 AL133480.2-201ENST00000456723 487 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 AC008620.1-201ENST00000468453 592 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 OR9A1P-202ENST00000484361 945 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.32□□□□□ -1.56
AP3S2P59780 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.32□□□□□ -1.56
AP3S2P59780 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.32□□□□□ -1.56
AP3S2P59780 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC5.32□□□□□ -1.56
AP3S2P59780 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC5.32□□□□□ -1.56
AP3S2P59780 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.32□□□□□ -1.56
AP3S2P59780 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 EIF3KP1-201ENST00000513279 656 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 AC012574.1-201ENST00000523874 252 ntTSL 5 BASIC5.32□□□□□ -1.56
AP3S2P59780 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.32□□□□□ -1.56
AP3S2P59780 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
AP3S2P59780 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.32□□□□□ -1.56
AP3S2P59780 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.32□□□□□ -1.56
AP3S2P59780 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 AC008759.2-201ENST00000585880 600 ntTSL 5 BASIC5.32□□□□□ -1.56
AP3S2P59780 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.32□□□□□ -1.56
AP3S2P59780 ACTG1P22-201ENST00000603793 1099 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 AC019257.2-201ENST00000605539 497 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.32□□□□□ -1.56
AP3S2P59780 MIR7159-201ENST00000620587 66 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 AC026523.2-201ENST00000625039 7739 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
AP3S2P59780 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
AP3S2P59780 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.32□□□□□ -1.56
AP3S2P59780 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AP3S2P59780 AC114774.1-201ENST00000507410 1770 ntBASIC5.32□□□□□ -1.56
AP3S2P59780 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP3S2P59780 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.31□□□□□ -1.56
AP3S2P59780 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP3S2P59780 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP3S2P59780 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms