Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC092332.1-201ENST00000563684 829 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CLDN6P56747 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.14□□□□□ -1.43
CLDN6P56747 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.14□□□□□ -1.43
CLDN6P56747 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN6P56747 MIR6768-201ENST00000610734 72 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 AC022106.1-201ENST00000612834 766 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN6P56747 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN6P56747 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN6P56747 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN6P56747 CIR1P2-201ENST00000514821 1342 ntBASIC6.14□□□□□ -1.43
CLDN6P56747 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN6P56747 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.14□□□□□ -1.43
CLDN6P56747 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN6P56747 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CLDN6P56747 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN6P56747 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLDN6P56747 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
CLDN6P56747 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.14□□□□□ -1.43
CLDN6P56747 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN6P56747 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.14□□□□□ -1.43
CLDN6P56747 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.13□□□□□ -1.43
CLDN6P56747 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
CLDN6P56747 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.13□□□□□ -1.43
CLDN6P56747 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 AC007998.4-201ENST00000612496 2533 ntBASIC6.13□□□□□ -1.43
CLDN6P56747 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 RNA5SP346-201ENST00000363541 121 ntBASIC6.13□□□□□ -1.43
CLDN6P56747 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
CLDN6P56747 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.13□□□□□ -1.43
CLDN6P56747 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CLDN6P56747 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.13□□□□□ -1.43
CLDN6P56747 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.13□□□□□ -1.43
CLDN6P56747 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.13□□□□□ -1.43
CLDN6P56747 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.13□□□□□ -1.43
CLDN6P56747 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.13□□□□□ -1.43
CLDN6P56747 NXT1P1-201ENST00000458481 316 ntBASIC6.13□□□□□ -1.43
CLDN6P56747 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.13□□□□□ -1.43
CLDN6P56747 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.13□□□□□ -1.43
CLDN6P56747 OR4D12P-201ENST00000509361 911 ntBASIC6.13□□□□□ -1.43
CLDN6P56747 Y_RNA.667-201ENST00000516212 107 ntBASIC6.13□□□□□ -1.43
CLDN6P56747 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.13□□□□□ -1.43
CLDN6P56747 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.13□□□□□ -1.43
CLDN6P56747 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.13□□□□□ -1.43
CLDN6P56747 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.13□□□□□ -1.43
CLDN6P56747 AC068768.2-201ENST00000602352 343 ntBASIC6.13□□□□□ -1.43
CLDN6P56747 AL157899.1-201ENST00000604110 936 ntBASIC6.13□□□□□ -1.43
CLDN6P56747 AC009237.12-201ENST00000604755 742 ntBASIC6.13□□□□□ -1.43
CLDN6P56747 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.13□□□□□ -1.43
CLDN6P56747 AP005431.1-201ENST00000618479 319 ntBASIC6.13□□□□□ -1.43
CLDN6P56747 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CLDN6P56747 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.13□□□□□ -1.43
CLDN6P56747 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.13□□□□□ -1.43
CLDN6P56747 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.13□□□□□ -1.43
CLDN6P56747 AC119674.1-217ENST00000641942 1086 ntBASIC6.13□□□□□ -1.43
CLDN6P56747 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 AC010168.2-201ENST00000562691 5428 ntBASIC6.13□□□□□ -1.43
CLDN6P56747 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
CLDN6P56747 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CLDN6P56747 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CLDN6P56747 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLDN6P56747 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.13□□□□□ -1.43
CLDN6P56747 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CLDN6P56747 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CLDN6P56747 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 MIR323A-201ENST00000362199 86 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.12□□□□□ -1.43
CLDN6P56747 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLDN6P56747 AL096800.1-201ENST00000405326 893 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 RN7SKP271-201ENST00000410528 320 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 MTCO1P25-201ENST00000414449 1799 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.12□□□□□ -1.43
CLDN6P56747 BX510359.3-201ENST00000422168 306 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 AL157884.1-201ENST00000424561 454 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 CDK7P1-201ENST00000434574 693 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 TUBB4BP6-201ENST00000437576 479 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.12□□□□□ -1.43
CLDN6P56747 AL355355.1-201ENST00000442900 793 ntBASIC6.12□□□□□ -1.43
CLDN6P56747 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.12□□□□□ -1.43
CLDN6P56747 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.12□□□□□ -1.43
CLDN6P56747 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms