Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.71□□□□□ -1.66
CMC4P56277 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CMC4P56277 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.71□□□□□ -1.66
CMC4P56277 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.71□□□□□ -1.66
CMC4P56277 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CMC4P56277 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.71□□□□□ -1.66
CMC4P56277 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.71□□□□□ -1.66
CMC4P56277 DYNLL1P1-201ENST00000595442 269 ntBASIC4.71□□□□□ -1.66
CMC4P56277 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.71□□□□□ -1.66
CMC4P56277 AC073046.2-201ENST00000604756 527 ntBASIC4.71□□□□□ -1.66
CMC4P56277 AC024589.2-201ENST00000605642 1294 ntBASIC4.71□□□□□ -1.66
CMC4P56277 AC048341.3-201ENST00000619323 491 ntBASIC4.71□□□□□ -1.66
CMC4P56277 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CMC4P56277 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.71□□□□□ -1.66
CMC4P56277 AL022322.2-201ENST00000624072 20397 ntBASIC4.71□□□□□ -1.66
CMC4P56277 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CMC4P56277 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CMC4P56277 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
CMC4P56277 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC4.71□□□□□ -1.66
CMC4P56277 AC024651.2-201ENST00000562480 2098 ntBASIC4.71□□□□□ -1.66
CMC4P56277 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC4.71□□□□□ -1.66
CMC4P56277 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CMC4P56277 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CMC4P56277 CCNT2P1-201ENST00000423082 1315 ntBASIC4.71□□□□□ -1.66
CMC4P56277 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 AC083843.2-201ENST00000568248 6253 ntBASIC4.7□□□□□ -1.66
CMC4P56277 SELE-203ENST00000367775 3389 ntTSL 5 BASIC4.7□□□□□ -1.66
CMC4P56277 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 AC092111.1-201ENST00000618256 3358 ntBASIC4.7□□□□□ -1.66
CMC4P56277 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CMC4P56277 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CMC4P56277 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CMC4P56277 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC4.7□□□□□ -1.66
CMC4P56277 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 RNU11-6P-201ENST00000391127 133 ntBASIC4.7□□□□□ -1.66
CMC4P56277 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 U3.43-201ENST00000410734 213 ntBASIC4.7□□□□□ -1.66
CMC4P56277 RN7SKP161-201ENST00000411110 305 ntBASIC4.7□□□□□ -1.66
CMC4P56277 AL353626.3-201ENST00000413399 657 ntBASIC4.7□□□□□ -1.66
CMC4P56277 HMGA1P8-201ENST00000414130 321 ntBASIC4.7□□□□□ -1.66
CMC4P56277 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.7□□□□□ -1.66
CMC4P56277 AK3P5-201ENST00000432033 519 ntBASIC4.7□□□□□ -1.66
CMC4P56277 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.7□□□□□ -1.66
CMC4P56277 OR3D1P-201ENST00000438288 955 ntBASIC4.7□□□□□ -1.66
CMC4P56277 AC079922.1-201ENST00000443291 359 ntBASIC4.7□□□□□ -1.66
CMC4P56277 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC4.7□□□□□ -1.66
CMC4P56277 AC019084.1-201ENST00000457337 432 ntBASIC4.7□□□□□ -1.66
CMC4P56277 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.7□□□□□ -1.66
CMC4P56277 H3F3AP5-201ENST00000475267 429 ntBASIC4.7□□□□□ -1.66
CMC4P56277 OR7E22P-201ENST00000478335 1035 ntBASIC4.7□□□□□ -1.66
CMC4P56277 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.7□□□□□ -1.66
CMC4P56277 AC095052.1-201ENST00000509955 863 ntBASIC4.7□□□□□ -1.66
CMC4P56277 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.7□□□□□ -1.66
CMC4P56277 RPA2P3-201ENST00000533268 770 ntBASIC4.7□□□□□ -1.66
CMC4P56277 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.7□□□□□ -1.66
CMC4P56277 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.7□□□□□ -1.66
CMC4P56277 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.7□□□□□ -1.66
CMC4P56277 AC005632.2-201ENST00000564271 828 ntBASIC4.7□□□□□ -1.66
CMC4P56277 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.7□□□□□ -1.66
CMC4P56277 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC4.7□□□□□ -1.66
CMC4P56277 AC138207.8-204ENST00000579588 527 ntBASIC4.7□□□□□ -1.66
CMC4P56277 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.7□□□□□ -1.66
CMC4P56277 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 AP001823.1-201ENST00000604056 1003 ntBASIC4.7□□□□□ -1.66
CMC4P56277 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.7□□□□□ -1.66
CMC4P56277 AL008723.3-201ENST00000608926 449 ntBASIC4.7□□□□□ -1.66
CMC4P56277 AL137246.2-201ENST00000613439 662 ntBASIC4.7□□□□□ -1.66
CMC4P56277 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC4.7□□□□□ -1.66
CMC4P56277 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC4.7□□□□□ -1.66
CMC4P56277 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CMC4P56277 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
CMC4P56277 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.7□□□□□ -1.66
CMC4P56277 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
CMC4P56277 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CMC4P56277 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC4.7□□□□□ -1.66
CMC4P56277 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC4.7□□□□□ -1.66
CMC4P56277 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CMC4P56277 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CMC4P56277 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC4.69□□□□□ -1.66
CMC4P56277 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC4.69□□□□□ -1.66
CMC4P56277 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CMC4P56277 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CMC4P56277 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CMC4P56277 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CMC4P56277 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
CMC4P56277 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CMC4P56277 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC4.69□□□□□ -1.66
CMC4P56277 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CMC4P56277 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CMC4P56277 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CMC4P56277 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CMC4P56277 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms