Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
COPAP53621 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COPAP53621 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COPAP53621 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
COPAP53621 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
COPAP53621 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
COPAP53621 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.84□□□□□ -1.32
COPAP53621 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.84□□□□□ -1.32
COPAP53621 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
COPAP53621 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
COPAP53621 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
COPAP53621 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COPAP53621 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COPAP53621 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COPAP53621 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.83□□□□□ -1.32
COPAP53621 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
COPAP53621 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
COPAP53621 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.83□□□□□ -1.32
COPAP53621 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COPAP53621 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COPAP53621 AC010168.2-201ENST00000562691 5428 ntBASIC6.83□□□□□ -1.32
COPAP53621 NEK2P4-201ENST00000425793 1329 ntBASIC6.83□□□□□ -1.32
COPAP53621 AL512310.3-201ENST00000547023 1335 ntBASIC6.83□□□□□ -1.32
COPAP53621 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COPAP53621 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COPAP53621 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
COPAP53621 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.83□□□□□ -1.32
COPAP53621 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
COPAP53621 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COPAP53621 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
COPAP53621 RNA5SP321-201ENST00000362722 111 ntBASIC6.83□□□□□ -1.32
COPAP53621 NME1P1-201ENST00000420914 382 ntBASIC6.83□□□□□ -1.32
COPAP53621 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.83□□□□□ -1.32
COPAP53621 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.83□□□□□ -1.32
COPAP53621 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.83□□□□□ -1.32
COPAP53621 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.83□□□□□ -1.32
COPAP53621 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.83□□□□□ -1.32
COPAP53621 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.83□□□□□ -1.32
COPAP53621 AC091849.1-201ENST00000509920 121 ntBASIC6.83□□□□□ -1.32
COPAP53621 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.83□□□□□ -1.32
COPAP53621 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.83□□□□□ -1.32
COPAP53621 RNU6-943P-201ENST00000516960 98 ntBASIC6.83□□□□□ -1.32
COPAP53621 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.83□□□□□ -1.32
COPAP53621 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.83□□□□□ -1.32
COPAP53621 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.83□□□□□ -1.32
COPAP53621 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.83□□□□□ -1.32
COPAP53621 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.83□□□□□ -1.32
COPAP53621 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.83□□□□□ -1.32
COPAP53621 AC025283.1-201ENST00000572039 734 ntBASIC6.83□□□□□ -1.32
COPAP53621 CTSLP2-201ENST00000580501 394 ntBASIC6.83□□□□□ -1.32
COPAP53621 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.83□□□□□ -1.32
COPAP53621 ADAD1P2-201ENST00000588476 646 ntBASIC6.83□□□□□ -1.32
COPAP53621 AC091133.5-201ENST00000603088 301 ntBASIC6.83□□□□□ -1.32
COPAP53621 AC144521.1-201ENST00000607148 956 ntBASIC6.83□□□□□ -1.32
COPAP53621 uc_338.29-201ENST00000615099 168 ntBASIC6.83□□□□□ -1.32
COPAP53621 AL035425.4-201ENST00000624509 1063 ntBASIC6.83□□□□□ -1.32
COPAP53621 AP000550.3-201ENST00000637734 379 ntBASIC6.83□□□□□ -1.32
COPAP53621 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COPAP53621 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COPAP53621 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.83□□□□□ -1.32
COPAP53621 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.83□□□□□ -1.32
COPAP53621 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
COPAP53621 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
COPAP53621 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.83□□□□□ -1.32
COPAP53621 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
COPAP53621 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
COPAP53621 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.83□□□□□ -1.32
COPAP53621 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.83□□□□□ -1.32
COPAP53621 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.83□□□□□ -1.32
COPAP53621 AC009779.8-201ENST00000641684 4384 ntBASIC6.83□□□□□ -1.32
COPAP53621 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COPAP53621 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COPAP53621 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC6.82□□□□□ -1.32
COPAP53621 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.82□□□□□ -1.32
COPAP53621 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COPAP53621 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COPAP53621 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
COPAP53621 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.82□□□□□ -1.32
COPAP53621 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.82□□□□□ -1.32
COPAP53621 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
COPAP53621 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
COPAP53621 AC007114.2-201ENST00000576014 4281 ntBASIC6.82□□□□□ -1.32
COPAP53621 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COPAP53621 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
COPAP53621 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COPAP53621 SNORA70.3-201ENST00000365075 132 ntBASIC6.82□□□□□ -1.32
COPAP53621 RAB5CP1-201ENST00000395972 580 ntBASIC6.82□□□□□ -1.32
COPAP53621 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
COPAP53621 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COPAP53621 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.82□□□□□ -1.32
COPAP53621 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.82□□□□□ -1.32
COPAP53621 PAICSP2-201ENST00000429118 1150 ntBASIC6.82□□□□□ -1.32
COPAP53621 NDUFA5P1-201ENST00000433858 341 ntBASIC6.82□□□□□ -1.32
COPAP53621 AC092106.2-201ENST00000436597 487 ntBASIC6.82□□□□□ -1.32
COPAP53621 MTND4P15-201ENST00000437913 1033 ntBASIC6.82□□□□□ -1.32
COPAP53621 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
COPAP53621 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.82□□□□□ -1.32
COPAP53621 SNRPBP1-201ENST00000443634 282 ntBASIC6.82□□□□□ -1.32
COPAP53621 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.82□□□□□ -1.32
COPAP53621 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms