Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.62□□□□□ -1.51
SRP9P49458 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SRP9P49458 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SRP9P49458 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SRP9P49458 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.62□□□□□ -1.51
SRP9P49458 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.62□□□□□ -1.51
SRP9P49458 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SRP9P49458 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SRP9P49458 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.62□□□□□ -1.51
SRP9P49458 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.62□□□□□ -1.51
SRP9P49458 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.62□□□□□ -1.51
SRP9P49458 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.62□□□□□ -1.51
SRP9P49458 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SRP9P49458 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SRP9P49458 AP001157.1-201ENST00000550837 2339 ntBASIC5.62□□□□□ -1.51
SRP9P49458 AL161912.4-201ENST00000623889 2468 ntBASIC5.62□□□□□ -1.51
SRP9P49458 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SRP9P49458 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SRP9P49458 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.61□□□□□ -1.51
SRP9P49458 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.61□□□□□ -1.51
SRP9P49458 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SRP9P49458 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SRP9P49458 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.61□□□□□ -1.51
SRP9P49458 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SRP9P49458 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SRP9P49458 RN7SKP184-201ENST00000362348 333 ntBASIC5.61□□□□□ -1.51
SRP9P49458 RNA5SP308-201ENST00000362532 115 ntBASIC5.61□□□□□ -1.51
SRP9P49458 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.61□□□□□ -1.51
SRP9P49458 GNG5P2-201ENST00000372054 207 ntBASIC5.61□□□□□ -1.51
SRP9P49458 ARSFP1-201ENST00000398758 477 ntBASIC5.61□□□□□ -1.51
SRP9P49458 NPM1P38-201ENST00000403835 865 ntBASIC5.61□□□□□ -1.51
SRP9P49458 AL590635.1-201ENST00000406314 586 ntBASIC5.61□□□□□ -1.51
SRP9P49458 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SRP9P49458 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.61□□□□□ -1.51
SRP9P49458 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SRP9P49458 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.61□□□□□ -1.51
SRP9P49458 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.61□□□□□ -1.51
SRP9P49458 RPEP4-201ENST00000437636 602 ntBASIC5.61□□□□□ -1.51
SRP9P49458 AL356121.1-201ENST00000442911 156 ntBASIC5.61□□□□□ -1.51
SRP9P49458 GAPDHP33-201ENST00000443168 1013 ntBASIC5.61□□□□□ -1.51
SRP9P49458 AL359955.1-201ENST00000455242 3275 ntBASIC5.61□□□□□ -1.51
SRP9P49458 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.61□□□□□ -1.51
SRP9P49458 snoU13.29-201ENST00000459370 104 ntBASIC5.61□□□□□ -1.51
SRP9P49458 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SRP9P49458 PSMC1P6-201ENST00000477233 1319 ntBASIC5.61□□□□□ -1.51
SRP9P49458 AC114324.2-202ENST00000503812 134 ntBASIC5.61□□□□□ -1.51
SRP9P49458 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.61□□□□□ -1.51
SRP9P49458 IGKV2-19-201ENST00000518132 283 ntBASIC5.61□□□□□ -1.51
SRP9P49458 AC008429.2-201ENST00000523057 864 ntBASIC5.61□□□□□ -1.51
SRP9P49458 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.61□□□□□ -1.51
SRP9P49458 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.61□□□□□ -1.51
SRP9P49458 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.61□□□□□ -1.51
SRP9P49458 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.61□□□□□ -1.51
SRP9P49458 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.61□□□□□ -1.51
SRP9P49458 AL121579.2-201ENST00000555466 590 ntBASIC5.61□□□□□ -1.51
SRP9P49458 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.61□□□□□ -1.51
SRP9P49458 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SRP9P49458 AC016839.1-201ENST00000578162 867 ntBASIC5.61□□□□□ -1.51
SRP9P49458 MIR744-201ENST00000578242 98 ntBASIC5.61□□□□□ -1.51
SRP9P49458 RN7SL66P-201ENST00000582099 264 ntBASIC5.61□□□□□ -1.51
SRP9P49458 AC024267.2-201ENST00000582737 417 ntBASIC5.61□□□□□ -1.51
SRP9P49458 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SRP9P49458 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.61□□□□□ -1.51
SRP9P49458 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
SRP9P49458 BUB1P1-201ENST00000603541 607 ntBASIC5.61□□□□□ -1.51
SRP9P49458 AL078595.2-201ENST00000605309 1780 ntBASIC5.61□□□□□ -1.51
SRP9P49458 AL390877.1-201ENST00000605704 214 ntBASIC5.61□□□□□ -1.51
SRP9P49458 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SRP9P49458 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.61□□□□□ -1.51
SRP9P49458 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.61□□□□□ -1.51
SRP9P49458 AC105235.1-201ENST00000623208 1816 ntBASIC5.61□□□□□ -1.51
SRP9P49458 AC068213.1-201ENST00000625124 226 ntBASIC5.61□□□□□ -1.51
SRP9P49458 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.61□□□□□ -1.51
SRP9P49458 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SRP9P49458 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.61□□□□□ -1.51
SRP9P49458 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SRP9P49458 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SRP9P49458 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SRP9P49458 AC005261.2-201ENST00000593427 4258 ntBASIC5.6□□□□□ -1.51
SRP9P49458 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SRP9P49458 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SRP9P49458 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
SRP9P49458 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SRP9P49458 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SRP9P49458 SHQ1P1-201ENST00000437111 1544 ntBASIC5.6□□□□□ -1.51
SRP9P49458 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.6□□□□□ -1.51
SRP9P49458 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SRP9P49458 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.6□□□□□ -1.51
SRP9P49458 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.6□□□□□ -1.51
SRP9P49458 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SRP9P49458 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SRP9P49458 U3.23-201ENST00000391132 200 ntBASIC5.6□□□□□ -1.51
SRP9P49458 AC245036.1-201ENST00000391727 309 ntBASIC5.6□□□□□ -1.51
SRP9P49458 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SRP9P49458 AL033519.1-201ENST00000407266 307 ntBASIC5.6□□□□□ -1.51
SRP9P49458 HMGA1P8-201ENST00000414130 321 ntBASIC5.6□□□□□ -1.51
SRP9P49458 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.6□□□□□ -1.51
SRP9P49458 DPPA2P2-201ENST00000418220 897 ntBASIC5.6□□□□□ -1.51
SRP9P49458 GAPDHP75-201ENST00000433910 943 ntBASIC5.6□□□□□ -1.51
SRP9P49458 AL022324.2-201ENST00000434827 780 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms