Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC8.21□□□□□ -1.1
PDE6BP35913 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC8.21□□□□□ -1.1
PDE6BP35913 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PDE6BP35913 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC8.21□□□□□ -1.1
PDE6BP35913 LSM3P4-201ENST00000502948 309 ntBASIC8.21□□□□□ -1.1
PDE6BP35913 AC008628.1-201ENST00000508663 265 ntBASIC8.21□□□□□ -1.1
PDE6BP35913 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC8.21□□□□□ -1.1
PDE6BP35913 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC8.21□□□□□ -1.1
PDE6BP35913 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC8.21□□□□□ -1.1
PDE6BP35913 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC8.21□□□□□ -1.1
PDE6BP35913 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC8.21□□□□□ -1.1
PDE6BP35913 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC8.21□□□□□ -1.1
PDE6BP35913 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
PDE6BP35913 AL356863.1-201ENST00000623378 1080 ntBASIC8.21□□□□□ -1.1
PDE6BP35913 AC099654.9-201ENST00000637055 678 ntBASIC8.21□□□□□ -1.1
PDE6BP35913 AC068137.4-201ENST00000638485 296 ntBASIC8.21□□□□□ -1.1
PDE6BP35913 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC8.21□□□□□ -1.1
PDE6BP35913 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PDE6BP35913 SEPT7P7-201ENST00000420492 1301 ntBASIC8.21□□□□□ -1.1
PDE6BP35913 RACGAP1P-201ENST00000550663 1879 ntBASIC8.21□□□□□ -1.1
PDE6BP35913 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.21□□□□□ -1.1
PDE6BP35913 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
PDE6BP35913 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.21□□□□□ -1.1
PDE6BP35913 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PDE6BP35913 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
PDE6BP35913 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.21□□□□□ -1.1
PDE6BP35913 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
PDE6BP35913 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
PDE6BP35913 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.2□□□□□ -1.1
PDE6BP35913 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
PDE6BP35913 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 KARSP1-201ENST00000451871 1752 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.2□□□□□ -1.1
PDE6BP35913 AC122713.2-201ENST00000624942 3335 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
PDE6BP35913 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
PDE6BP35913 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.2□□□□□ -1.1
PDE6BP35913 RPL12P13-201ENST00000310055 497 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
PDE6BP35913 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 AL050305.1-201ENST00000399993 1230 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 RPS3AP25-201ENST00000411660 793 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 LUZP4P1-201ENST00000415420 344 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC8.2□□□□□ -1.1
PDE6BP35913 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC8.2□□□□□ -1.1
PDE6BP35913 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.2□□□□□ -1.1
PDE6BP35913 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 RBMY3AP-201ENST00000449381 1145 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC8.2□□□□□ -1.1
PDE6BP35913 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 HMGN1P15-201ENST00000513870 295 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC8.2□□□□□ -1.1
PDE6BP35913 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC8.2□□□□□ -1.1
PDE6BP35913 AC008429.2-201ENST00000523057 864 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.2□□□□□ -1.1
PDE6BP35913 CYCSP38-201ENST00000559840 322 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 RN7SL208P-201ENST00000577964 296 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC8.2□□□□□ -1.1
PDE6BP35913 AC087575.1-201ENST00000585087 229 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 BNIP3P31-201ENST00000604515 566 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 AC112220.2-201ENST00000605513 533 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 AC009974.1-201ENST00000608881 455 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 IGKV2OR2-10-201ENST00000613976 311 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 AP003789.1-201ENST00000617737 605 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PDE6BP35913 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 AC022613.3-201ENST00000560740 1346 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
PDE6BP35913 AL157831.2-201ENST00000564681 3095 ntBASIC8.2□□□□□ -1.1
PDE6BP35913 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.2□□□□□ -1.1
PDE6BP35913 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PDE6BP35913 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
PDE6BP35913 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.19□□□□□ -1.1
PDE6BP35913 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDE6BP35913 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.19□□□□□ -1.1
PDE6BP35913 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
PDE6BP35913 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PDE6BP35913 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC8.19□□□□□ -1.1
PDE6BP35913 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.19□□□□□ -1.1
PDE6BP35913 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PDE6BP35913 CDY10P-201ENST00000452415 1567 ntBASIC8.19□□□□□ -1.1
PDE6BP35913 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PDE6BP35913 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.19□□□□□ -1.1
PDE6BP35913 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.19□□□□□ -1.1
PDE6BP35913 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms