Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.87□□□□□ -1.31
HOXD13P35453 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD13P35453 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
HOXD13P35453 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD13P35453 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD13P35453 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD13P35453 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD13P35453 AC119674.1-213ENST00000641177 1386 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 RNU1-49P-201ENST00000363468 159 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 RN7SKP108-201ENST00000411367 328 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.87□□□□□ -1.31
HOXD13P35453 VN1R20P-201ENST00000425215 966 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.87□□□□□ -1.31
HOXD13P35453 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.87□□□□□ -1.31
HOXD13P35453 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXD13P35453 H3F3AP5-201ENST00000475267 429 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXD13P35453 AC098818.1-201ENST00000478593 252 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.87□□□□□ -1.31
HOXD13P35453 AC010343.2-201ENST00000510162 224 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXD13P35453 AC084033.1-201ENST00000550830 633 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 OR4H6P-201ENST00000563771 921 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 OR1E3-201ENST00000575608 948 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 OOSP1P2-201ENST00000579644 351 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.87□□□□□ -1.31
HOXD13P35453 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.87□□□□□ -1.31
HOXD13P35453 AC022106.1-201ENST00000612834 766 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 NF1P10-201ENST00000613227 742 ntBASIC6.87□□□□□ -1.31
HOXD13P35453 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.87□□□□□ -1.31
HOXD13P35453 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXD13P35453 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
HOXD13P35453 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HOXD13P35453 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.87□□□□□ -1.31
HOXD13P35453 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD13P35453 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.87□□□□□ -1.31
HOXD13P35453 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD13P35453 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD13P35453 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
HOXD13P35453 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD13P35453 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
HOXD13P35453 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
HOXD13P35453 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
HOXD13P35453 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HOXD13P35453 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXD13P35453 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXD13P35453 RNF19BPY-201ENST00000458209 1550 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXD13P35453 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
HOXD13P35453 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXD13P35453 AC120036.2-201ENST00000509729 1474 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXD13P35453 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
HOXD13P35453 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
HOXD13P35453 RNA5SP110-201ENST00000362638 115 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXD13P35453 AC116036.1-201ENST00000412199 367 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 AC007562.1-201ENST00000421819 517 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 TPTE2P1-204ENST00000435256 593 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXD13P35453 AC016908.1-201ENST00000442571 1219 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 AC023274.2-201ENST00000445264 521 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 RANP2-201ENST00000456833 229 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 AL022319.1-201ENST00000458183 1167 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 AC073594.1-201ENST00000462065 364 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXD13P35453 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HOXD13P35453 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.86□□□□□ -1.31
HOXD13P35453 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXD13P35453 ZNF519P4-201ENST00000514008 125 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXD13P35453 RPA2P3-201ENST00000533268 770 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXD13P35453 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.86□□□□□ -1.31
HOXD13P35453 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXD13P35453 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.86□□□□□ -1.31
HOXD13P35453 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.86□□□□□ -1.31
HOXD13P35453 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.86□□□□□ -1.31
HOXD13P35453 AC010325.3-201ENST00000641084 394 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 AL078595.2-201ENST00000605309 1780 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXD13P35453 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXD13P35453 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HOXD13P35453 CDY11P-201ENST00000447168 1651 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 AL359976.1-201ENST00000418655 3528 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
HOXD13P35453 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.86□□□□□ -1.31
HOXD13P35453 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
HOXD13P35453 AC034229.2-201ENST00000566945 2508 ntBASIC6.86□□□□□ -1.31
HOXD13P35453 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HOXD13P35453 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
HOXD13P35453 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HOXD13P35453 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
HOXD13P35453 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
HOXD13P35453 AKAP17BP-201ENST00000431706 2719 ntBASIC6.85□□□□□ -1.31
HOXD13P35453 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.85□□□□□ -1.31
HOXD13P35453 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 240.7 ms