Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.2□□□□□ -1.42
SHMT2P34897 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.2□□□□□ -1.42
SHMT2P34897 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.2□□□□□ -1.42
SHMT2P34897 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
SHMT2P34897 AL137246.2-201ENST00000613439 662 ntBASIC6.2□□□□□ -1.42
SHMT2P34897 AL352984.2-202ENST00000613699 155 ntBASIC6.2□□□□□ -1.42
SHMT2P34897 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHMT2P34897 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.2□□□□□ -1.42
SHMT2P34897 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHMT2P34897 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.2□□□□□ -1.42
SHMT2P34897 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
SHMT2P34897 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.2□□□□□ -1.42
SHMT2P34897 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.2□□□□□ -1.42
SHMT2P34897 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.2□□□□□ -1.42
SHMT2P34897 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHMT2P34897 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.2□□□□□ -1.42
SHMT2P34897 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SHMT2P34897 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHMT2P34897 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHMT2P34897 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
SHMT2P34897 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SHMT2P34897 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.19□□□□□ -1.42
SHMT2P34897 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHMT2P34897 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
SHMT2P34897 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SHMT2P34897 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.19□□□□□ -1.42
SHMT2P34897 CASC19-246ENST00000641625 1606 ntBASIC6.19□□□□□ -1.42
SHMT2P34897 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHMT2P34897 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHMT2P34897 AC116036.1-201ENST00000412199 367 ntBASIC6.19□□□□□ -1.42
SHMT2P34897 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SHMT2P34897 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.19□□□□□ -1.42
SHMT2P34897 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.19□□□□□ -1.42
SHMT2P34897 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.19□□□□□ -1.42
SHMT2P34897 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.19□□□□□ -1.42
SHMT2P34897 POU5F1P5-201ENST00000445059 658 ntBASIC6.19□□□□□ -1.42
SHMT2P34897 CCNJP2-201ENST00000457810 1163 ntBASIC6.19□□□□□ -1.42
SHMT2P34897 AC005017.1-201ENST00000482002 490 ntBASIC6.19□□□□□ -1.42
SHMT2P34897 RN7SL714P-201ENST00000487050 298 ntBASIC6.19□□□□□ -1.42
SHMT2P34897 AL117692.1-201ENST00000494283 713 ntBASIC6.19□□□□□ -1.42
SHMT2P34897 HMGN1P16-201ENST00000508308 283 ntBASIC6.19□□□□□ -1.42
SHMT2P34897 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.19□□□□□ -1.42
SHMT2P34897 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHMT2P34897 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.19□□□□□ -1.42
SHMT2P34897 uc_338.29-201ENST00000615099 168 ntBASIC6.19□□□□□ -1.42
SHMT2P34897 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.19□□□□□ -1.42
SHMT2P34897 AC099654.11-201ENST00000638857 294 ntBASIC6.19□□□□□ -1.42
SHMT2P34897 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.19□□□□□ -1.42
SHMT2P34897 AC105235.1-201ENST00000623208 1816 ntBASIC6.19□□□□□ -1.42
SHMT2P34897 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHMT2P34897 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SHMT2P34897 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHMT2P34897 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHMT2P34897 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SHMT2P34897 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.19□□□□□ -1.42
SHMT2P34897 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHMT2P34897 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SHMT2P34897 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
SHMT2P34897 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHMT2P34897 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.18□□□□□ -1.42
SHMT2P34897 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHMT2P34897 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.18□□□□□ -1.42
SHMT2P34897 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHMT2P34897 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.18□□□□□ -1.42
SHMT2P34897 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SHMT2P34897 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHMT2P34897 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHMT2P34897 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
SHMT2P34897 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
SHMT2P34897 AL136984.1-201ENST00000607611 1893 ntBASIC6.18□□□□□ -1.42
SHMT2P34897 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHMT2P34897 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SHMT2P34897 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHMT2P34897 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHMT2P34897 DHFRP2-201ENST00000414224 547 ntBASIC6.18□□□□□ -1.42
SHMT2P34897 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.18□□□□□ -1.42
SHMT2P34897 AL139158.1-201ENST00000424719 340 ntBASIC6.18□□□□□ -1.42
SHMT2P34897 VN1R20P-201ENST00000425215 966 ntBASIC6.18□□□□□ -1.42
SHMT2P34897 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.18□□□□□ -1.42
SHMT2P34897 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.18□□□□□ -1.42
SHMT2P34897 RPL34P27-201ENST00000428810 349 ntBASIC6.18□□□□□ -1.42
SHMT2P34897 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.18□□□□□ -1.42
SHMT2P34897 RN7SL165P-201ENST00000477476 291 ntBASIC6.18□□□□□ -1.42
SHMT2P34897 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHMT2P34897 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.18□□□□□ -1.42
SHMT2P34897 AC113367.2-201ENST00000505749 160 ntBASIC6.18□□□□□ -1.42
SHMT2P34897 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.18□□□□□ -1.42
SHMT2P34897 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.18□□□□□ -1.42
SHMT2P34897 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.18□□□□□ -1.42
SHMT2P34897 AP005639.1-201ENST00000526939 192 ntBASIC6.18□□□□□ -1.42
SHMT2P34897 AC009729.1-201ENST00000548873 1133 ntBASIC6.18□□□□□ -1.42
SHMT2P34897 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.18□□□□□ -1.42
SHMT2P34897 AC233702.7-202ENST00000582941 211 ntBASIC6.18□□□□□ -1.42
SHMT2P34897 AC005828.7-201ENST00000607331 556 ntBASIC6.18□□□□□ -1.42
SHMT2P34897 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.18□□□□□ -1.42
SHMT2P34897 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SHMT2P34897 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHMT2P34897 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHMT2P34897 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHMT2P34897 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms