Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL359704.2-201ENST00000604335 521 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 AC100767.2-201ENST00000604840 693 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 AC245014.3-201ENST00000618589 347 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 AL512652.1-201ENST00000619006 500 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 AL512356.3-201ENST00000623005 461 ntBASIC6.62□□□□□ -1.35
HOXA9P31269 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.62□□□□□ -1.35
HOXA9P31269 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXA9P31269 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXA9P31269 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HOXA9P31269 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXA9P31269 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXA9P31269 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HOXA9P31269 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HOXA9P31269 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.62□□□□□ -1.35
HOXA9P31269 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
HOXA9P31269 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
HOXA9P31269 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXA9P31269 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.61□□□□□ -1.35
HOXA9P31269 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HOXA9P31269 RNA5SP350-201ENST00000363298 111 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXA9P31269 AL050335.1-201ENST00000396909 869 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 RN7SKP206-201ENST00000410823 293 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 CDY17P-201ENST00000414121 1282 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXA9P31269 RPS7P14-201ENST00000426405 583 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXA9P31269 RPL23AP19-201ENST00000436229 369 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 AL353662.1-201ENST00000439099 327 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXA9P31269 AL158068.1-201ENST00000506116 616 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXA9P31269 RNA5SP271-201ENST00000516700 88 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXA9P31269 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.61□□□□□ -1.35
HOXA9P31269 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.61□□□□□ -1.35
HOXA9P31269 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXA9P31269 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.61□□□□□ -1.35
HOXA9P31269 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXA9P31269 AC090236.2-201ENST00000587933 1101 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 AC008521.2-201ENST00000591021 259 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 AL953862.2-201ENST00000603089 820 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXA9P31269 MIR6729-201ENST00000618194 65 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXA9P31269 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
HOXA9P31269 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 KARSP1-201ENST00000451871 1752 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.61□□□□□ -1.35
HOXA9P31269 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HOXA9P31269 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.61□□□□□ -1.35
HOXA9P31269 UGT2B27P-201ENST00000505092 1620 ntBASIC6.61□□□□□ -1.35
HOXA9P31269 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
HOXA9P31269 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
HOXA9P31269 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
HOXA9P31269 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXA9P31269 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXA9P31269 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
HOXA9P31269 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXA9P31269 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXA9P31269 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HOXA9P31269 CLCA3P-203ENST00000490028 2781 ntBASIC6.6□□□□□ -1.35
HOXA9P31269 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXA9P31269 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXA9P31269 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.6□□□□□ -1.35
HOXA9P31269 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
HOXA9P31269 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXA9P31269 OR2M1P-201ENST00000318104 951 ntBASIC6.6□□□□□ -1.35
HOXA9P31269 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXA9P31269 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXA9P31269 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXA9P31269 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXA9P31269 AC073109.1-201ENST00000445066 978 ntBASIC6.6□□□□□ -1.35
HOXA9P31269 MORF4-201ENST00000447135 971 ntBASIC6.6□□□□□ -1.35
HOXA9P31269 NXT1P1-201ENST00000458481 316 ntBASIC6.6□□□□□ -1.35
HOXA9P31269 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXA9P31269 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXA9P31269 AC068522.1-201ENST00000482895 345 ntBASIC6.6□□□□□ -1.35
HOXA9P31269 AC023818.1-201ENST00000498379 384 ntBASIC6.6□□□□□ -1.35
HOXA9P31269 AC104109.1-201ENST00000498563 436 ntBASIC6.6□□□□□ -1.35
HOXA9P31269 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HOXA9P31269 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.6□□□□□ -1.35
HOXA9P31269 RNA5SP340-201ENST00000517132 107 ntBASIC6.6□□□□□ -1.35
HOXA9P31269 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.6□□□□□ -1.35
HOXA9P31269 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.6□□□□□ -1.35
HOXA9P31269 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms