Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC012368.3-201ENST00000604190 219 ntBASIC6.35□□□□□ -1.39
CDH3P22223 AL589743.6-201ENST00000611025 117 ntBASIC6.35□□□□□ -1.39
CDH3P22223 AC005277.2-201ENST00000617898 390 ntBASIC6.35□□□□□ -1.39
CDH3P22223 AC010809.3-201ENST00000621310 641 ntBASIC6.35□□□□□ -1.39
CDH3P22223 AC089999.3-201ENST00000622440 577 ntBASIC6.35□□□□□ -1.39
CDH3P22223 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH3P22223 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH3P22223 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH3P22223 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH3P22223 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.35□□□□□ -1.39
CDH3P22223 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH3P22223 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
CDH3P22223 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH3P22223 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.35□□□□□ -1.39
CDH3P22223 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH3P22223 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CDH3P22223 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.35□□□□□ -1.39
CDH3P22223 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH3P22223 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CDH3P22223 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.35□□□□□ -1.39
CDH3P22223 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH3P22223 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CDH3P22223 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CDH3P22223 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CDH3P22223 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH3P22223 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH3P22223 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH3P22223 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDH3P22223 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.34□□□□□ -1.39
CDH3P22223 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH3P22223 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH3P22223 HSPD1P8-201ENST00000400121 1658 ntBASIC6.34□□□□□ -1.39
CDH3P22223 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH3P22223 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
CDH3P22223 RNA5SP485-201ENST00000365053 119 ntBASIC6.34□□□□□ -1.39
CDH3P22223 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH3P22223 MRPS6P2-201ENST00000381143 370 ntBASIC6.34□□□□□ -1.39
CDH3P22223 AP003170.5-201ENST00000397185 335 ntBASIC6.34□□□□□ -1.39
CDH3P22223 RN7SKP129-201ENST00000410288 299 ntBASIC6.34□□□□□ -1.39
CDH3P22223 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH3P22223 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH3P22223 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDH3P22223 AL139184.1-202ENST00000422303 222 ntBASIC6.34□□□□□ -1.39
CDH3P22223 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.34□□□□□ -1.39
CDH3P22223 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.34□□□□□ -1.39
CDH3P22223 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.34□□□□□ -1.39
CDH3P22223 LINC00328-2P-201ENST00000436585 219 ntBASIC6.34□□□□□ -1.39
CDH3P22223 RN7SL165P-201ENST00000477476 291 ntBASIC6.34□□□□□ -1.39
CDH3P22223 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH3P22223 RPL19P11-201ENST00000495944 589 ntBASIC6.34□□□□□ -1.39
CDH3P22223 GOLGA5P1-201ENST00000507317 980 ntBASIC6.34□□□□□ -1.39
CDH3P22223 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDH3P22223 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.34□□□□□ -1.39
CDH3P22223 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH3P22223 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.34□□□□□ -1.39
CDH3P22223 AC026956.1-201ENST00000558741 396 ntBASIC6.34□□□□□ -1.39
CDH3P22223 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH3P22223 RN7SL208P-201ENST00000577964 296 ntBASIC6.34□□□□□ -1.39
CDH3P22223 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.34□□□□□ -1.39
CDH3P22223 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.34□□□□□ -1.39
CDH3P22223 MIR6780B-201ENST00000610307 79 ntBASIC6.34□□□□□ -1.39
CDH3P22223 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.34□□□□□ -1.39
CDH3P22223 OR8A1-204ENST00000642111 1145 ntBASIC6.34□□□□□ -1.39
CDH3P22223 AL157831.2-201ENST00000564681 3095 ntBASIC6.34□□□□□ -1.39
CDH3P22223 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDH3P22223 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDH3P22223 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.34□□□□□ -1.39
CDH3P22223 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CDH3P22223 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.34□□□□□ -1.39
CDH3P22223 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
CDH3P22223 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CDH3P22223 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH3P22223 NEK2P4-201ENST00000425793 1329 ntBASIC6.33□□□□□ -1.4
CDH3P22223 AL512310.3-201ENST00000547023 1335 ntBASIC6.33□□□□□ -1.4
CDH3P22223 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH3P22223 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDH3P22223 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDH3P22223 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH3P22223 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDH3P22223 RN7SKP250-201ENST00000363924 321 ntBASIC6.33□□□□□ -1.4
CDH3P22223 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.33□□□□□ -1.4
CDH3P22223 AC245036.1-201ENST00000391727 309 ntBASIC6.33□□□□□ -1.4
CDH3P22223 AL035696.2-201ENST00000407941 709 ntBASIC6.33□□□□□ -1.4
CDH3P22223 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH3P22223 AL359092.1-201ENST00000417156 265 ntBASIC6.33□□□□□ -1.4
CDH3P22223 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH3P22223 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH3P22223 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDH3P22223 AC010086.1-201ENST00000437359 1052 ntBASIC6.33□□□□□ -1.4
CDH3P22223 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.33□□□□□ -1.4
CDH3P22223 AL020997.1-201ENST00000446554 349 ntBASIC6.33□□□□□ -1.4
CDH3P22223 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH3P22223 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH3P22223 SEPT14P1-201ENST00000458703 648 ntBASIC6.33□□□□□ -1.4
CDH3P22223 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH3P22223 RN7SL649P-201ENST00000496974 275 ntBASIC6.33□□□□□ -1.4
CDH3P22223 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH3P22223 RPL3P13-201ENST00000550415 216 ntBASIC6.33□□□□□ -1.4
CDH3P22223 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.33□□□□□ -1.4
CDH3P22223 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms