Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGA1P17096 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
HMGA1P17096 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.44□□□□□ -1.38
HMGA1P17096 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.44□□□□□ -1.38
HMGA1P17096 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGA1P17096 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
HMGA1P17096 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
HMGA1P17096 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HMGA1P17096 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGA1P17096 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.44□□□□□ -1.38
HMGA1P17096 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.44□□□□□ -1.38
HMGA1P17096 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HMGA1P17096 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGA1P17096 AC105749.1-201ENST00000631338 2008 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGA1P17096 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HMGA1P17096 AC119674.1-202ENST00000641333 1860 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 AL591848.4-201ENST00000567832 3472 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGA1P17096 AP001541.1-201ENST00000623322 1904 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGA1P17096 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGA1P17096 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HMGA1P17096 RNU11-6P-201ENST00000391127 133 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGA1P17096 RPS3P2-201ENST00000421346 701 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGA1P17096 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGA1P17096 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 TRIM60P16-201ENST00000444048 694 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 AL512593.1-201ENST00000444758 779 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 SUMO2P10-201ENST00000452006 288 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 RN7SL193P-201ENST00000491708 276 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 AC096754.1-201ENST00000508904 818 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGA1P17096 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGA1P17096 IGKV3D-34-201ENST00000522638 302 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGA1P17096 IGHV1-14-201ENST00000523391 241 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 AP003396.4-201ENST00000527574 265 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGA1P17096 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 NPIPB1P-202ENST00000588786 828 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGA1P17096 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 AC100767.2-201ENST00000604840 693 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 AC096708.4-201ENST00000620563 552 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 AL137067.2-201ENST00000621202 131 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 AL357562.1-201ENST00000624911 609 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 AC022726.2-201ENST00000634673 547 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
HMGA1P17096 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGA1P17096 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGA1P17096 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGA1P17096 AC091305.2-201ENST00000624049 1576 ntBASIC6.43□□□□□ -1.38
HMGA1P17096 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGA1P17096 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGA1P17096 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGA1P17096 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGA1P17096 AC024587.1-201ENST00000505925 2157 ntBASIC6.42□□□□□ -1.38
HMGA1P17096 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGA1P17096 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGA1P17096 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HMGA1P17096 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGA1P17096 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGA1P17096 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGA1P17096 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGA1P17096 AC005618.1-201ENST00000606901 3148 ntBASIC6.42□□□□□ -1.38
HMGA1P17096 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGA1P17096 TMSB4XP2-201ENST00000335179 210 ntBASIC6.42□□□□□ -1.38
HMGA1P17096 AC092642.1-201ENST00000392417 425 ntBASIC6.42□□□□□ -1.38
HMGA1P17096 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGA1P17096 AL096829.1-201ENST00000413677 457 ntBASIC6.42□□□□□ -1.38
HMGA1P17096 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.42□□□□□ -1.38
HMGA1P17096 RNA5SP271-201ENST00000516700 88 ntBASIC6.42□□□□□ -1.38
HMGA1P17096 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.42□□□□□ -1.38
HMGA1P17096 AC073581.1-201ENST00000519036 575 ntBASIC6.42□□□□□ -1.38
HMGA1P17096 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.42□□□□□ -1.38
HMGA1P17096 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.42□□□□□ -1.38
HMGA1P17096 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.42□□□□□ -1.38
HMGA1P17096 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.42□□□□□ -1.38
HMGA1P17096 AL645933.2-201ENST00000606743 1207 ntBASIC6.42□□□□□ -1.38
HMGA1P17096 AC141002.1-201ENST00000607025 279 ntBASIC6.42□□□□□ -1.38
HMGA1P17096 MIR6862-1-201ENST00000613016 70 ntBASIC6.42□□□□□ -1.38
HMGA1P17096 MIR6862-2-201ENST00000614755 70 ntBASIC6.42□□□□□ -1.38
HMGA1P17096 AC026124.2-201ENST00000621847 656 ntBASIC6.42□□□□□ -1.38
HMGA1P17096 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGA1P17096 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HMGA1P17096 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
HMGA1P17096 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms