Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL1P09341 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CXCL1P09341 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL1P09341 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CXCL1P09341 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL1P09341 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC4.77□□□□□ -1.65
CXCL1P09341 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CXCL1P09341 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CXCL1P09341 VIM2P-201ENST00000402383 1294 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL1P09341 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL1P09341 RPLP1P10-201ENST00000413972 339 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL1P09341 REREP1Y-201ENST00000422655 198 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC4.77□□□□□ -1.65
CXCL1P09341 NIP7P1-201ENST00000433227 512 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 OSTCP2-201ENST00000437956 444 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 REREP2Y-201ENST00000439103 200 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 PRKAR1AP1-201ENST00000441422 1162 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 RPSAP40-201ENST00000442343 891 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 AC023271.1-201ENST00000445936 1090 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC4.77□□□□□ -1.65
CXCL1P09341 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL1P09341 AC079193.1-201ENST00000460497 588 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL1P09341 SCG5-207ENST00000497208 949 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL1P09341 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC4.77□□□□□ -1.65
CXCL1P09341 GAPDHP38-201ENST00000503632 1002 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.77□□□□□ -1.65
CXCL1P09341 RNA5SP230-201ENST00000517039 122 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 RNA5SP400-201ENST00000517155 111 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC4.77□□□□□ -1.65
CXCL1P09341 AC008429.2-201ENST00000523057 864 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC4.77□□□□□ -1.65
CXCL1P09341 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC4.77□□□□□ -1.65
CXCL1P09341 PPIAP6-201ENST00000557078 499 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC4.77□□□□□ -1.65
CXCL1P09341 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL1P09341 CCL2-202ENST00000580907 736 ntTSL 2 BASIC4.77□□□□□ -1.65
CXCL1P09341 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL1P09341 AC005495.1-201ENST00000586611 1211 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC4.77□□□□□ -1.65
CXCL1P09341 MIR7848-201ENST00000617402 101 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 AL138693.1-201ENST00000622219 129 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 HBG1-202ENST00000632727 369 ntTSL 3 BASIC4.77□□□□□ -1.65
CXCL1P09341 MIR665-201ENST00000635949 72 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL1P09341 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL1P09341 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL1P09341 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL1P09341 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CXCL1P09341 AC006600.2-201ENST00000624834 2506 ntBASIC4.77□□□□□ -1.65
CXCL1P09341 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL1P09341 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.77□□□□□ -1.65
CXCL1P09341 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.76□□□□□ -1.65
CXCL1P09341 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
CXCL1P09341 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.76□□□□□ -1.65
CXCL1P09341 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.76□□□□□ -1.65
CXCL1P09341 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC4.76□□□□□ -1.65
CXCL1P09341 VTRNA3-1P-201ENST00000362552 102 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 RN7SKP185-201ENST00000362813 326 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 RN7SKP145-201ENST00000363291 303 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 MIR433-201ENST00000384837 93 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC4.76□□□□□ -1.65
CXCL1P09341 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.76□□□□□ -1.65
CXCL1P09341 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC4.76□□□□□ -1.65
CXCL1P09341 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC4.76□□□□□ -1.65
CXCL1P09341 VDAC2P3-201ENST00000430995 828 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC4.76□□□□□ -1.65
CXCL1P09341 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC4.76□□□□□ -1.65
CXCL1P09341 AC010240.2-201ENST00000445363 1205 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC4.76□□□□□ -1.65
CXCL1P09341 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.76□□□□□ -1.65
CXCL1P09341 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC4.76□□□□□ -1.65
CXCL1P09341 RPL7AP71-201ENST00000451120 739 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC4.76□□□□□ -1.65
CXCL1P09341 RN7SL197P-201ENST00000466981 299 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 RN7SL390P-201ENST00000470634 284 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.76□□□□□ -1.65
CXCL1P09341 SCARNA5-201ENST00000516201 276 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 FTH1P11-201ENST00000517577 551 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC4.76□□□□□ -1.65
CXCL1P09341 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC4.76□□□□□ -1.65
CXCL1P09341 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC4.76□□□□□ -1.65
CXCL1P09341 MYL2-203ENST00000548438 664 ntTSL 3 BASIC4.76□□□□□ -1.65
CXCL1P09341 LSM3P2-201ENST00000551246 273 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 AC009120.3-201ENST00000563335 499 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 FRG2IP-201ENST00000563581 781 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.76□□□□□ -1.65
CXCL1P09341 ZNF322P1-201ENST00000568013 1209 ntBASIC4.76□□□□□ -1.65
CXCL1P09341 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC4.76□□□□□ -1.65
CXCL1P09341 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC4.76□□□□□ -1.65
CXCL1P09341 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.76□□□□□ -1.65
CXCL1P09341 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CXCL1P09341 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms