Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC5.88□□□□□ -1.47
MT-ND1P03886 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.88□□□□□ -1.47
MT-ND1P03886 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.88□□□□□ -1.47
MT-ND1P03886 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.88□□□□□ -1.47
MT-ND1P03886 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.88□□□□□ -1.47
MT-ND1P03886 AC009237.12-201ENST00000604755 742 ntBASIC5.88□□□□□ -1.47
MT-ND1P03886 AC019257.2-201ENST00000605539 497 ntBASIC5.88□□□□□ -1.47
MT-ND1P03886 MIR8082-201ENST00000612488 81 ntBASIC5.88□□□□□ -1.47
MT-ND1P03886 AC003992.1-201ENST00000635364 557 ntBASIC5.88□□□□□ -1.47
MT-ND1P03886 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
MT-ND1P03886 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.88□□□□□ -1.47
MT-ND1P03886 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
MT-ND1P03886 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MT-ND1P03886 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MT-ND1P03886 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.88□□□□□ -1.47
MT-ND1P03886 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MT-ND1P03886 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MT-ND1P03886 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MT-ND1P03886 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
MT-ND1P03886 DNM1P47-203ENST00000571780 12667 ntBASIC5.88□□□□□ -1.47
MT-ND1P03886 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.88□□□□□ -1.47
MT-ND1P03886 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
MT-ND1P03886 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.87□□□□□ -1.47
MT-ND1P03886 AC010401.2-201ENST00000575137 4934 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.87□□□□□ -1.47
MT-ND1P03886 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MT-ND1P03886 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MT-ND1P03886 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
MT-ND1P03886 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
MT-ND1P03886 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MT-ND1P03886 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MT-ND1P03886 AC074375.1-201ENST00000372993 192 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 MRPS6P2-201ENST00000381143 370 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.87□□□□□ -1.47
MT-ND1P03886 U3.52-201ENST00000384034 216 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
MT-ND1P03886 FDPSP5-201ENST00000399474 1057 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 RN7SKP281-201ENST00000410472 352 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 RANP6-201ENST00000413691 644 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 AC021876.1-201ENST00000425959 359 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 BTG3P1-201ENST00000435859 716 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.87□□□□□ -1.47
MT-ND1P03886 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.87□□□□□ -1.47
MT-ND1P03886 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.87□□□□□ -1.47
MT-ND1P03886 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MT-ND1P03886 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.87□□□□□ -1.47
MT-ND1P03886 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MT-ND1P03886 AC022080.2-201ENST00000452932 533 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 VPS25P1-201ENST00000455691 508 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 RN7SKP198-201ENST00000459286 306 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 AC073594.1-201ENST00000462065 364 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.87□□□□□ -1.47
MT-ND1P03886 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.87□□□□□ -1.47
MT-ND1P03886 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.87□□□□□ -1.47
MT-ND1P03886 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
MT-ND1P03886 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.87□□□□□ -1.47
MT-ND1P03886 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.87□□□□□ -1.47
MT-ND1P03886 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC5.87□□□□□ -1.47
MT-ND1P03886 AC130366.1-201ENST00000526505 1192 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 AC103855.4-201ENST00000533158 265 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.87□□□□□ -1.47
MT-ND1P03886 RPL41P2-201ENST00000544920 409 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.87□□□□□ -1.47
MT-ND1P03886 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.87□□□□□ -1.47
MT-ND1P03886 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.87□□□□□ -1.47
MT-ND1P03886 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.87□□□□□ -1.47
MT-ND1P03886 MIR132-201ENST00000591554 101 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.87□□□□□ -1.47
MT-ND1P03886 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.87□□□□□ -1.47
MT-ND1P03886 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
MT-ND1P03886 RAB28P4-201ENST00000622233 665 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 AC005514.1-201ENST00000623521 208 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 AC010132.4-201ENST00000569883 1368 ntBASIC5.87□□□□□ -1.47
MT-ND1P03886 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
MT-ND1P03886 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.87□□□□□ -1.47
MT-ND1P03886 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.87□□□□□ -1.47
MT-ND1P03886 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
MT-ND1P03886 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MT-ND1P03886 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.87□□□□□ -1.47
MT-ND1P03886 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
MT-ND1P03886 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.86□□□□□ -1.47
MT-ND1P03886 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MT-ND1P03886 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MT-ND1P03886 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.86□□□□□ -1.47
MT-ND1P03886 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MT-ND1P03886 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
MT-ND1P03886 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MT-ND1P03886 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
MT-ND1P03886 RNA5SP140-201ENST00000364524 92 ntBASIC5.86□□□□□ -1.47
MT-ND1P03886 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
MT-ND1P03886 AL391419.1-201ENST00000398901 1275 ntBASIC5.86□□□□□ -1.47
MT-ND1P03886 AL445238.1-204ENST00000400311 463 ntBASIC5.86□□□□□ -1.47
MT-ND1P03886 MRPL32P1-201ENST00000406301 247 ntBASIC5.86□□□□□ -1.47
MT-ND1P03886 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC5.86□□□□□ -1.47
MT-ND1P03886 RN7SKP129-201ENST00000410288 299 ntBASIC5.86□□□□□ -1.47
MT-ND1P03886 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.86□□□□□ -1.47
MT-ND1P03886 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.86□□□□□ -1.47
MT-ND1P03886 AL672212.1-201ENST00000422246 400 ntBASIC5.86□□□□□ -1.47
MT-ND1P03886 E2F6P1-201ENST00000428850 745 ntBASIC5.86□□□□□ -1.47
MT-ND1P03886 E2F6P3-201ENST00000441743 743 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms