Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL035410.2-201ENST00000604963 864 ntBASIC6□□□□□ -1.45
CLPTM1O96005 AL139041.1-201ENST00000605480 610 ntBASIC6□□□□□ -1.45
CLPTM1O96005 AL136097.3-201ENST00000611097 505 ntBASIC6□□□□□ -1.45
CLPTM1O96005 MIR6883-201ENST00000614952 78 ntBASIC6□□□□□ -1.45
CLPTM1O96005 AC005753.1-201ENST00000623837 618 ntBASIC6□□□□□ -1.45
CLPTM1O96005 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6□□□□□ -1.45
CLPTM1O96005 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLPTM1O96005 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CLPTM1O96005 AC126474.2-201ENST00000623268 1750 ntBASIC6□□□□□ -1.45
CLPTM1O96005 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLPTM1O96005 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLPTM1O96005 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLPTM1O96005 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC116158.1-201ENST00000560231 2129 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.99□□□□□ -1.45
CLPTM1O96005 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.99□□□□□ -1.45
CLPTM1O96005 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.99□□□□□ -1.45
CLPTM1O96005 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CLPTM1O96005 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CLPTM1O96005 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CLPTM1O96005 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 RNA5SP453-201ENST00000362503 119 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.99□□□□□ -1.45
CLPTM1O96005 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CLPTM1O96005 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC091492.1-201ENST00000419844 272 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 YWHAZP5-201ENST00000419975 730 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 REREP1Y-201ENST00000422655 198 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC016027.5-201ENST00000427227 210 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.99□□□□□ -1.45
CLPTM1O96005 REREP2Y-201ENST00000439103 200 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.99□□□□□ -1.45
CLPTM1O96005 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.99□□□□□ -1.45
CLPTM1O96005 RNU6-775P-201ENST00000459318 96 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.99□□□□□ -1.45
CLPTM1O96005 RN7SL379P-201ENST00000479912 293 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 RN7SL868P-201ENST00000485915 303 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 AL035690.1-201ENST00000490892 383 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC096661.1-201ENST00000515870 822 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.99□□□□□ -1.45
CLPTM1O96005 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC007537.1-201ENST00000539347 327 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.99□□□□□ -1.45
CLPTM1O96005 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.99□□□□□ -1.45
CLPTM1O96005 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.99□□□□□ -1.45
CLPTM1O96005 MIR5010-201ENST00000582846 120 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 WDR45BP1-201ENST00000583470 1029 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.99□□□□□ -1.45
CLPTM1O96005 SIGLEC31P-201ENST00000594237 551 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 AC004908.1-201ENST00000606572 541 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.99□□□□□ -1.45
CLPTM1O96005 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.99□□□□□ -1.45
CLPTM1O96005 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.99□□□□□ -1.45
CLPTM1O96005 AC022726.2-201ENST00000634673 547 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLPTM1O96005 ICE2P1-201ENST00000512800 1849 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 BIN2P1-201ENST00000504996 1530 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 CAP1P2-201ENST00000417455 1409 ntBASIC5.99□□□□□ -1.45
CLPTM1O96005 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
CLPTM1O96005 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
CLPTM1O96005 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.98□□□□□ -1.45
CLPTM1O96005 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLPTM1O96005 AP001284.1-201ENST00000528393 2118 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLPTM1O96005 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLPTM1O96005 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.98□□□□□ -1.45
CLPTM1O96005 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLPTM1O96005 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLPTM1O96005 AC010401.2-201ENST00000575137 4934 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLPTM1O96005 SNORA70.3-201ENST00000365075 132 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.98□□□□□ -1.45
CLPTM1O96005 MIR99A-201ENST00000384906 81 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CLPTM1O96005 AL359715.1-201ENST00000404330 555 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 CYCSP17-201ENST00000407870 315 ntBASIC5.98□□□□□ -1.45
CLPTM1O96005 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms