Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 VTI1BP4-201ENST00000427516 527 ntBASIC6.07□□□□□ -1.44
SNX3O60493 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC6.07□□□□□ -1.44
SNX3O60493 MTND2P40-201ENST00000436718 841 ntBASIC6.07□□□□□ -1.44
SNX3O60493 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.07□□□□□ -1.44
SNX3O60493 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX3O60493 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX3O60493 RN7SL263P-201ENST00000467969 290 ntBASIC6.07□□□□□ -1.44
SNX3O60493 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.07□□□□□ -1.44
SNX3O60493 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.07□□□□□ -1.44
SNX3O60493 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC6.07□□□□□ -1.44
SNX3O60493 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX3O60493 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.07□□□□□ -1.44
SNX3O60493 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.07□□□□□ -1.44
SNX3O60493 AC009729.1-201ENST00000548873 1133 ntBASIC6.07□□□□□ -1.44
SNX3O60493 AC069240.2-201ENST00000550242 609 ntBASIC6.07□□□□□ -1.44
SNX3O60493 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNX3O60493 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.07□□□□□ -1.44
SNX3O60493 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX3O60493 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.07□□□□□ -1.44
SNX3O60493 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.07□□□□□ -1.44
SNX3O60493 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX3O60493 RN7SL664P-201ENST00000584239 305 ntBASIC6.07□□□□□ -1.44
SNX3O60493 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX3O60493 AC022960.2-201ENST00000616300 666 ntBASIC6.07□□□□□ -1.44
SNX3O60493 MRPL57P3-201ENST00000619218 176 ntBASIC6.07□□□□□ -1.44
SNX3O60493 AC022400.9-201ENST00000623633 273 ntBASIC6.07□□□□□ -1.44
SNX3O60493 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX3O60493 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
SNX3O60493 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SNX3O60493 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX3O60493 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNX3O60493 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNX3O60493 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNX3O60493 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SNX3O60493 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SNX3O60493 AL158152.1-201ENST00000602652 1435 ntBASIC6.07□□□□□ -1.44
SNX3O60493 AL136984.1-201ENST00000607611 1893 ntBASIC6.07□□□□□ -1.44
SNX3O60493 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX3O60493 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.07□□□□□ -1.44
SNX3O60493 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.06□□□□□ -1.44
SNX3O60493 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
SNX3O60493 MIPEPP2-201ENST00000422560 1819 ntBASIC6.06□□□□□ -1.44
SNX3O60493 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.06□□□□□ -1.44
SNX3O60493 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
SNX3O60493 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.06□□□□□ -1.44
SNX3O60493 PPIAP24-201ENST00000328558 471 ntBASIC6.06□□□□□ -1.44
SNX3O60493 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SNX3O60493 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
SNX3O60493 SNORA5.1-201ENST00000384275 131 ntBASIC6.06□□□□□ -1.44
SNX3O60493 MIR614-201ENST00000385082 90 ntBASIC6.06□□□□□ -1.44
SNX3O60493 U3.23-201ENST00000391132 200 ntBASIC6.06□□□□□ -1.44
SNX3O60493 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SNX3O60493 PCNAP3-201ENST00000397222 778 ntBASIC6.06□□□□□ -1.44
SNX3O60493 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
SNX3O60493 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SNX3O60493 NPM1P18-201ENST00000434232 732 ntBASIC6.06□□□□□ -1.44
SNX3O60493 RPL14P5-201ENST00000436474 730 ntBASIC6.06□□□□□ -1.44
SNX3O60493 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.06□□□□□ -1.44
SNX3O60493 RPL7P14-201ENST00000449851 741 ntBASIC6.06□□□□□ -1.44
SNX3O60493 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX3O60493 RSU1P1-201ENST00000453416 441 ntBASIC6.06□□□□□ -1.44
SNX3O60493 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SNX3O60493 RN7SL647P-201ENST00000485429 300 ntBASIC6.06□□□□□ -1.44
SNX3O60493 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX3O60493 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX3O60493 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX3O60493 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.06□□□□□ -1.44
SNX3O60493 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 ZNF322P1-201ENST00000568013 1209 ntBASIC6.06□□□□□ -1.44
SNX3O60493 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX3O60493 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC6.06□□□□□ -1.44
SNX3O60493 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.06□□□□□ -1.44
SNX3O60493 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.06□□□□□ -1.44
SNX3O60493 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.06□□□□□ -1.44
SNX3O60493 AL136097.3-201ENST00000611097 505 ntBASIC6.06□□□□□ -1.44
SNX3O60493 AL161931.1-201ENST00000612768 246 ntBASIC6.06□□□□□ -1.44
SNX3O60493 RN7SL820P-201ENST00000616437 299 ntBASIC6.06□□□□□ -1.44
SNX3O60493 AC133485.6-201ENST00000624045 688 ntBASIC6.06□□□□□ -1.44
SNX3O60493 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SNX3O60493 OR7A1P-202ENST00000641542 1158 ntBASIC6.06□□□□□ -1.44
SNX3O60493 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SNX3O60493 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SNX3O60493 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
SNX3O60493 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SNX3O60493 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNX3O60493 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms