Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC004805.3-201ENST00000603178 310 ntBASIC4.99□□□□□ -1.61
SSSCA1O60232 AC073046.2-201ENST00000604756 527 ntBASIC4.99□□□□□ -1.61
SSSCA1O60232 AC009120.7-201ENST00000623452 780 ntBASIC4.99□□□□□ -1.61
SSSCA1O60232 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.99□□□□□ -1.61
SSSCA1O60232 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC4.99□□□□□ -1.61
SSSCA1O60232 OR7A1P-202ENST00000641542 1158 ntBASIC4.99□□□□□ -1.61
SSSCA1O60232 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSSCA1O60232 SAMM50P1-201ENST00000455403 1399 ntBASIC4.99□□□□□ -1.61
SSSCA1O60232 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
SSSCA1O60232 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSSCA1O60232 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SSSCA1O60232 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC4.99□□□□□ -1.61
SSSCA1O60232 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSSCA1O60232 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSSCA1O60232 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC4.98□□□□□ -1.61
SSSCA1O60232 AC092451.3-201ENST00000625067 1343 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SSSCA1O60232 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.98□□□□□ -1.61
SSSCA1O60232 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.98□□□□□ -1.61
SSSCA1O60232 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 AL161756.3-201ENST00000641216 2071 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.98□□□□□ -1.61
SSSCA1O60232 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 SNORA43.1-201ENST00000364863 140 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 TINAG-202ENST00000370864 692 ntTSL 2 BASIC4.98□□□□□ -1.61
SSSCA1O60232 SNORA11D-201ENST00000408548 128 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 SNORA11E-201ENST00000408778 128 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 RN7SKP30-201ENST00000411373 334 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC4.98□□□□□ -1.61
SSSCA1O60232 CLIC4P3-201ENST00000422221 752 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC4.98□□□□□ -1.61
SSSCA1O60232 AHCYP8-201ENST00000425108 209 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 RPL5P2-201ENST00000429598 854 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 AC013403.1-201ENST00000436954 263 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC4.98□□□□□ -1.61
SSSCA1O60232 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.98□□□□□ -1.61
SSSCA1O60232 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC4.98□□□□□ -1.61
SSSCA1O60232 Z83838.1-202ENST00000456225 839 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 RPS12P20-201ENST00000464109 380 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC4.98□□□□□ -1.61
SSSCA1O60232 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC4.98□□□□□ -1.61
SSSCA1O60232 TPM3P3-201ENST00000521343 354 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC4.98□□□□□ -1.61
SSSCA1O60232 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC4.98□□□□□ -1.61
SSSCA1O60232 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC4.98□□□□□ -1.61
SSSCA1O60232 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC4.98□□□□□ -1.61
SSSCA1O60232 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC4.98□□□□□ -1.61
SSSCA1O60232 AC244502.2-201ENST00000543361 851 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 DCN-215ENST00000550099 719 ntTSL 2 BASIC4.98□□□□□ -1.61
SSSCA1O60232 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC4.98□□□□□ -1.61
SSSCA1O60232 MIR4312-201ENST00000579909 76 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.98□□□□□ -1.61
SSSCA1O60232 AC024451.4-201ENST00000602578 752 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 AL035417.2-201ENST00000603887 796 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC4.98□□□□□ -1.61
SSSCA1O60232 AL136097.3-201ENST00000611097 505 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 RAB28P4-201ENST00000622233 665 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 AC069542.2-201ENST00000624816 216 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC4.98□□□□□ -1.61
SSSCA1O60232 AC063952.1-203ENST00000634410 658 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
SSSCA1O60232 AC010132.4-201ENST00000569883 1368 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 AC130360.2-201ENST00000533477 1556 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.98□□□□□ -1.61
SSSCA1O60232 NLRP3P1-201ENST00000622303 1785 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
SSSCA1O60232 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSSCA1O60232 SMG1P5-202ENST00000529428 4219 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 SMG1P2-201ENST00000566127 4221 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 AL355488.2-201ENST00000609909 2850 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 GVINP1-202ENST00000531871 7271 ntBASIC4.98□□□□□ -1.61
SSSCA1O60232 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.97□□□□□ -1.61
SSSCA1O60232 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC4.97□□□□□ -1.61
SSSCA1O60232 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SSSCA1O60232 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 AP000432.2-201ENST00000624164 2048 ntBASIC4.97□□□□□ -1.61
SSSCA1O60232 AC232271.1-201ENST00000602455 2715 ntBASIC4.97□□□□□ -1.61
SSSCA1O60232 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.97□□□□□ -1.61
SSSCA1O60232 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SSSCA1O60232 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
SSSCA1O60232 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSSCA1O60232 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms