Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL133351.3-201ENST00000454998 193 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 RN7SL714P-201ENST00000487050 298 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 RN7SL104P-201ENST00000498686 293 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.45□□□□□ -1.38
SMAD6O43541 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 IGKV1D-22-201ENST00000518953 324 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 AC073581.1-201ENST00000519036 575 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.45□□□□□ -1.38
SMAD6O43541 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.45□□□□□ -1.38
SMAD6O43541 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.45□□□□□ -1.38
SMAD6O43541 AC036111.2-201ENST00000533247 901 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.45□□□□□ -1.38
SMAD6O43541 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.45□□□□□ -1.38
SMAD6O43541 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.45□□□□□ -1.38
SMAD6O43541 GLYATL1P2-202ENST00000588046 902 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.45□□□□□ -1.38
SMAD6O43541 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.45□□□□□ -1.38
SMAD6O43541 MIR7109-201ENST00000613748 65 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 AC009120.7-201ENST00000623452 780 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.45□□□□□ -1.38
SMAD6O43541 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
SMAD6O43541 CASC19-274ENST00000642018 970 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 AC006213.6-201ENST00000623722 4179 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 AC007406.5-201ENST00000570140 3170 ntBASIC6.45□□□□□ -1.38
SMAD6O43541 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SMAD6O43541 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.45□□□□□ -1.38
SMAD6O43541 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.44□□□□□ -1.38
SMAD6O43541 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 AP002370.1-201ENST00000528055 1602 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 AL133243.2-201ENST00000610331 1621 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.44□□□□□ -1.38
SMAD6O43541 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SMAD6O43541 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.44□□□□□ -1.38
SMAD6O43541 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SMAD6O43541 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 CXADRP1-201ENST00000398098 1095 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 RN7SKP108-201ENST00000411367 328 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 AC092865.3-201ENST00000425390 1026 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 RPS7P14-201ENST00000426405 583 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.44□□□□□ -1.38
SMAD6O43541 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.44□□□□□ -1.38
SMAD6O43541 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.44□□□□□ -1.38
SMAD6O43541 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.44□□□□□ -1.38
SMAD6O43541 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SMAD6O43541 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.44□□□□□ -1.38
SMAD6O43541 POU5F1P5-201ENST00000445059 658 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.44□□□□□ -1.38
SMAD6O43541 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.44□□□□□ -1.38
SMAD6O43541 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 SNX18P25-201ENST00000510539 758 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 HSD3BP3-201ENST00000514706 994 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.44□□□□□ -1.38
SMAD6O43541 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.44□□□□□ -1.38
SMAD6O43541 BCAS2P1-201ENST00000528022 632 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.44□□□□□ -1.38
SMAD6O43541 NPIPB14P-203ENST00000532298 987 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SMAD6O43541 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC6.44□□□□□ -1.38
SMAD6O43541 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.44□□□□□ -1.38
SMAD6O43541 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.44□□□□□ -1.38
SMAD6O43541 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.44□□□□□ -1.38
SMAD6O43541 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.44□□□□□ -1.38
SMAD6O43541 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.44□□□□□ -1.38
SMAD6O43541 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.44□□□□□ -1.38
SMAD6O43541 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.44□□□□□ -1.38
SMAD6O43541 CXADRP3-202ENST00000617265 1100 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 AP003789.1-201ENST00000617737 605 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 AL356094.1-201ENST00000624663 1212 ntBASIC6.44□□□□□ -1.38
SMAD6O43541 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.44□□□□□ -1.38
SMAD6O43541 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SMAD6O43541 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SMAD6O43541 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
SMAD6O43541 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.43□□□□□ -1.38
SMAD6O43541 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.43□□□□□ -1.38
SMAD6O43541 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SMAD6O43541 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.43□□□□□ -1.38
SMAD6O43541 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.43□□□□□ -1.38
SMAD6O43541 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SMAD6O43541 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms