Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MORF4-201ENST00000447135 971 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.06□□□□□ -1.44
SLC28A1O00337 AC018645.1-201ENST00000505003 109 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.06□□□□□ -1.44
SLC28A1O00337 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.06□□□□□ -1.44
SLC28A1O00337 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC28A1O00337 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.06□□□□□ -1.44
SLC28A1O00337 IGHV4-55-201ENST00000520889 368 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.06□□□□□ -1.44
SLC28A1O00337 AL133399.1-201ENST00000527476 298 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 RPA2P3-201ENST00000533268 770 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.06□□□□□ -1.44
SLC28A1O00337 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.06□□□□□ -1.44
SLC28A1O00337 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.06□□□□□ -1.44
SLC28A1O00337 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.06□□□□□ -1.44
SLC28A1O00337 CHEK2P2-201ENST00000554701 672 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.06□□□□□ -1.44
SLC28A1O00337 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.06□□□□□ -1.44
SLC28A1O00337 AL078624.2-201ENST00000605063 554 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 U1.25-201ENST00000614085 162 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.06□□□□□ -1.44
SLC28A1O00337 U1.34-201ENST00000618578 162 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 U1.31-201ENST00000620022 160 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC6.06□□□□□ -1.44
SLC28A1O00337 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC28A1O00337 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SLC28A1O00337 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.06□□□□□ -1.44
SLC28A1O00337 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.06□□□□□ -1.44
SLC28A1O00337 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.06□□□□□ -1.44
SLC28A1O00337 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SLC28A1O00337 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.06□□□□□ -1.44
SLC28A1O00337 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SLC28A1O00337 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC28A1O00337 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC28A1O00337 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC28A1O00337 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SLC28A1O00337 AC093297.3-201ENST00000607056 2517 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.05□□□□□ -1.44
SLC28A1O00337 SAMMSON-210ENST00000641260 1308 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.05□□□□□ -1.44
SLC28A1O00337 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC28A1O00337 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
SLC28A1O00337 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
SLC28A1O00337 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SLC28A1O00337 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC28A1O00337 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
SLC28A1O00337 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC28A1O00337 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC28A1O00337 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SLC28A1O00337 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SLC28A1O00337 SNORA7A-201ENST00000384765 139 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC28A1O00337 AL121835.1-201ENST00000404250 354 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 NFU1P1-201ENST00000413128 774 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.05□□□□□ -1.44
SLC28A1O00337 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC28A1O00337 LDHAP2-201ENST00000437325 985 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.05□□□□□ -1.44
SLC28A1O00337 SLAMF6P1-201ENST00000451067 602 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.05□□□□□ -1.44
SLC28A1O00337 RANP2-201ENST00000456833 229 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 RN7SL643P-201ENST00000471845 291 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 RN7SL413P-201ENST00000482700 297 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 RN7SL655P-201ENST00000486087 298 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 AC009567.2-201ENST00000502989 349 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC28A1O00337 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.05□□□□□ -1.44
SLC28A1O00337 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.05□□□□□ -1.44
SLC28A1O00337 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.05□□□□□ -1.44
SLC28A1O00337 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC28A1O00337 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.05□□□□□ -1.44
SLC28A1O00337 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC28A1O00337 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.05□□□□□ -1.44
SLC28A1O00337 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC28A1O00337 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SLC28A1O00337 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.05□□□□□ -1.44
SLC28A1O00337 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.05□□□□□ -1.44
SLC28A1O00337 RN7SL32P-201ENST00000580514 281 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 AC005332.4-201ENST00000592752 579 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 SNORA74.4-201ENST00000607595 199 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC28A1O00337 OR7E91P-202ENST00000642062 1198 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
SLC28A1O00337 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SLC28A1O00337 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC28A1O00337 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.05□□□□□ -1.44
SLC28A1O00337 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.05□□□□□ -1.44
SLC28A1O00337 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.05□□□□□ -1.44
SLC28A1O00337 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SLC28A1O00337 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SLC28A1O00337 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.05□□□□□ -1.44
SLC28A1O00337 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SLC28A1O00337 AP001541.1-201ENST00000623322 1904 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 HDAC1P2-201ENST00000453661 1398 ntBASIC6.05□□□□□ -1.44
SLC28A1O00337 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.05□□□□□ -1.44
SLC28A1O00337 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC28A1O00337 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.04□□□□□ -1.44
SLC28A1O00337 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SLC28A1O00337 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SLC28A1O00337 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms