Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.91□□□□□ -1.46
UPK1AO00322 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.91□□□□□ -1.46
UPK1AO00322 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.91□□□□□ -1.46
UPK1AO00322 AC002127.1-201ENST00000421305 225 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
UPK1AO00322 GAPDHP19-201ENST00000431768 1005 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.91□□□□□ -1.46
UPK1AO00322 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.91□□□□□ -1.46
UPK1AO00322 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.91□□□□□ -1.46
UPK1AO00322 COX4I1P2-201ENST00000447446 547 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 VPS25P1-201ENST00000455691 508 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.91□□□□□ -1.46
UPK1AO00322 RN7SL643P-201ENST00000471845 291 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.91□□□□□ -1.46
UPK1AO00322 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.91□□□□□ -1.46
UPK1AO00322 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 AC124891.1-201ENST00000536322 519 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 AC008055.1-201ENST00000547032 609 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.91□□□□□ -1.46
UPK1AO00322 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.91□□□□□ -1.46
UPK1AO00322 RN7SL66P-201ENST00000582099 264 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 AC026898.1-201ENST00000586404 571 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.91□□□□□ -1.46
UPK1AO00322 AL589765.6-201ENST00000601909 549 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 AC027334.1-201ENST00000603257 310 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.91□□□□□ -1.46
UPK1AO00322 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.91□□□□□ -1.46
UPK1AO00322 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 AL138693.1-201ENST00000622219 129 ntBASIC5.91□□□□□ -1.46
UPK1AO00322 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.91□□□□□ -1.46
UPK1AO00322 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.91□□□□□ -1.46
UPK1AO00322 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.91□□□□□ -1.46
UPK1AO00322 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.91□□□□□ -1.46
UPK1AO00322 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
UPK1AO00322 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
UPK1AO00322 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
UPK1AO00322 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
UPK1AO00322 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
UPK1AO00322 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
UPK1AO00322 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
UPK1AO00322 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
UPK1AO00322 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
UPK1AO00322 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UPK1AO00322 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.9□□□□□ -1.46
UPK1AO00322 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.9□□□□□ -1.46
UPK1AO00322 AC003045.1-201ENST00000398779 713 ntBASIC5.9□□□□□ -1.46
UPK1AO00322 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.9□□□□□ -1.46
UPK1AO00322 AL360013.1-201ENST00000419031 858 ntBASIC5.9□□□□□ -1.46
UPK1AO00322 AC016027.5-201ENST00000427227 210 ntBASIC5.9□□□□□ -1.46
UPK1AO00322 AL354707.3-201ENST00000427308 331 ntBASIC5.9□□□□□ -1.46
UPK1AO00322 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UPK1AO00322 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
UPK1AO00322 AC092601.1-201ENST00000444526 383 ntBASIC5.9□□□□□ -1.46
UPK1AO00322 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.9□□□□□ -1.46
UPK1AO00322 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.9□□□□□ -1.46
UPK1AO00322 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.9□□□□□ -1.46
UPK1AO00322 RN7SL39P-201ENST00000462264 297 ntBASIC5.9□□□□□ -1.46
UPK1AO00322 GM2AP2-201ENST00000491764 562 ntBASIC5.9□□□□□ -1.46
UPK1AO00322 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
UPK1AO00322 AC010343.2-201ENST00000510162 224 ntBASIC5.9□□□□□ -1.46
UPK1AO00322 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UPK1AO00322 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.9□□□□□ -1.46
UPK1AO00322 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.9□□□□□ -1.46
UPK1AO00322 AC135983.3-201ENST00000528049 1226 ntBASIC5.9□□□□□ -1.46
UPK1AO00322 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.9□□□□□ -1.46
UPK1AO00322 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.9□□□□□ -1.46
UPK1AO00322 TDGP1-201ENST00000543961 1229 ntBASIC5.9□□□□□ -1.46
UPK1AO00322 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
UPK1AO00322 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.9□□□□□ -1.46
UPK1AO00322 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.9□□□□□ -1.46
UPK1AO00322 MIR7159-201ENST00000620587 66 ntBASIC5.9□□□□□ -1.46
UPK1AO00322 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.9□□□□□ -1.46
UPK1AO00322 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
UPK1AO00322 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
UPK1AO00322 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
UPK1AO00322 AC087516.1-201ENST00000561236 2428 ntBASIC5.9□□□□□ -1.47
UPK1AO00322 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
UPK1AO00322 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
UPK1AO00322 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.9□□□□□ -1.47
UPK1AO00322 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
UPK1AO00322 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.9□□□□□ -1.47
UPK1AO00322 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
UPK1AO00322 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
UPK1AO00322 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPK1AO00322 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPK1AO00322 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPK1AO00322 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPK1AO00322 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
UPK1AO00322 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
UPK1AO00322 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
UPK1AO00322 RNA5SP485-201ENST00000365053 119 ntBASIC5.89□□□□□ -1.47
UPK1AO00322 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.89□□□□□ -1.47
UPK1AO00322 DHFRP2-201ENST00000414224 547 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms