Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RPSAP65-201ENST00000429660 595 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 RPSAP41-201ENST00000439695 860 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.11□□□□□ -1.43
PDLIM1O00151 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 RPL23AP28-201ENST00000448062 470 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM1O00151 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM1O00151 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM1O00151 AC009244.1-201ENST00000450566 258 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 AL096803.1-201ENST00000456921 1021 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 AC114982.2-201ENST00000461396 358 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM1O00151 AC122714.1-201ENST00000502510 459 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 AC021820.1-201ENST00000525564 808 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 GTF2IP11-201ENST00000526931 420 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 AL121579.2-201ENST00000555466 590 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM1O00151 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.11□□□□□ -1.43
PDLIM1O00151 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.11□□□□□ -1.43
PDLIM1O00151 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM1O00151 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.11□□□□□ -1.43
PDLIM1O00151 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.11□□□□□ -1.43
PDLIM1O00151 BUB1P1-201ENST00000603541 607 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.11□□□□□ -1.43
PDLIM1O00151 MIR6070-201ENST00000613967 103 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 AC024255.1-201ENST00000614376 102 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 AL353684.1-201ENST00000622677 1120 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 AC017037.4-201ENST00000624526 826 ntBASIC6.11□□□□□ -1.43
PDLIM1O00151 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.11□□□□□ -1.43
PDLIM1O00151 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.11□□□□□ -1.43
PDLIM1O00151 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC6.11□□□□□ -1.43
PDLIM1O00151 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM1O00151 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PDLIM1O00151 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM1O00151 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM1O00151 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM1O00151 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM1O00151 RPS2P45-201ENST00000469997 2057 ntBASIC6.1□□□□□ -1.43
PDLIM1O00151 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PDLIM1O00151 TRIM53CP-201ENST00000531490 1354 ntBASIC6.1□□□□□ -1.43
PDLIM1O00151 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
PDLIM1O00151 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PDLIM1O00151 RNA5SP176-201ENST00000390956 110 ntBASIC6.1□□□□□ -1.43
PDLIM1O00151 RPL18AP14-201ENST00000417685 526 ntBASIC6.1□□□□□ -1.43
PDLIM1O00151 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.1□□□□□ -1.43
PDLIM1O00151 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM1O00151 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.1□□□□□ -1.43
PDLIM1O00151 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.1□□□□□ -1.43
PDLIM1O00151 RPL7AP71-201ENST00000451120 739 ntBASIC6.1□□□□□ -1.43
PDLIM1O00151 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC6.1□□□□□ -1.43
PDLIM1O00151 AL079303.1-201ENST00000486611 463 ntBASIC6.1□□□□□ -1.43
PDLIM1O00151 AC022415.1-202ENST00000486612 523 ntBASIC6.1□□□□□ -1.43
PDLIM1O00151 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
PDLIM1O00151 RNU2-45P-201ENST00000516068 187 ntBASIC6.1□□□□□ -1.43
PDLIM1O00151 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.1□□□□□ -1.43
PDLIM1O00151 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.1□□□□□ -1.43
PDLIM1O00151 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.1□□□□□ -1.43
PDLIM1O00151 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 RN7SL32P-201ENST00000580514 281 ntBASIC6.1□□□□□ -1.43
PDLIM1O00151 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.1□□□□□ -1.43
PDLIM1O00151 AL356986.1-201ENST00000604085 341 ntBASIC6.1□□□□□ -1.43
PDLIM1O00151 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM1O00151 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PDLIM1O00151 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PDLIM1O00151 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.1□□□□□ -1.43
PDLIM1O00151 AC074141.1-201ENST00000588129 2995 ntBASIC6.1□□□□□ -1.43
PDLIM1O00151 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 HSPD1P1-201ENST00000503199 1726 ntBASIC6.1□□□□□ -1.43
PDLIM1O00151 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PDLIM1O00151 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM1O00151 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PDLIM1O00151 MTCO1P7-201ENST00000419523 1542 ntBASIC6.09□□□□□ -1.43
PDLIM1O00151 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM1O00151 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.09□□□□□ -1.43
PDLIM1O00151 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.09□□□□□ -1.43
PDLIM1O00151 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
PDLIM1O00151 AC105235.1-201ENST00000623208 1816 ntBASIC6.09□□□□□ -1.43
PDLIM1O00151 AC004656.1-201ENST00000568479 4951 ntBASIC6.09□□□□□ -1.43
PDLIM1O00151 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM1O00151 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.09□□□□□ -1.43
PDLIM1O00151 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM1O00151 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms