Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DDX39AO00148 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DDX39AO00148 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DDX39AO00148 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DDX39AO00148 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
DDX39AO00148 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.07□□□□□ -1.28
DDX39AO00148 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.07□□□□□ -1.28
DDX39AO00148 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DDX39AO00148 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DDX39AO00148 BIN2P1-201ENST00000504996 1530 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DDX39AO00148 AC062029.1-202ENST00000606164 3651 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
DDX39AO00148 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
DDX39AO00148 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DDX39AO00148 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DDX39AO00148 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DDX39AO00148 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.06□□□□□ -1.28
DDX39AO00148 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
DDX39AO00148 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
DDX39AO00148 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DDX39AO00148 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
DDX39AO00148 SNORA77.2-201ENST00000408571 112 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 RN7SKP144-201ENST00000411108 279 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.06□□□□□ -1.28
DDX39AO00148 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.06□□□□□ -1.28
DDX39AO00148 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.06□□□□□ -1.28
DDX39AO00148 AC097721.1-201ENST00000427150 1253 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.06□□□□□ -1.28
DDX39AO00148 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.06□□□□□ -1.28
DDX39AO00148 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.06□□□□□ -1.28
DDX39AO00148 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.06□□□□□ -1.28
DDX39AO00148 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.06□□□□□ -1.28
DDX39AO00148 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 OR7E99P-201ENST00000505750 922 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 KHDC1P1-201ENST00000511053 508 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 Y_RNA.710-201ENST00000516975 110 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 AC009879.1-201ENST00000520029 839 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.06□□□□□ -1.28
DDX39AO00148 OR7E158P-201ENST00000524483 910 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.06□□□□□ -1.28
DDX39AO00148 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.06□□□□□ -1.28
DDX39AO00148 AC090115.2-201ENST00000548060 883 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 AC090888.3-201ENST00000558917 509 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 AC007066.2-202ENST00000566531 914 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 AC007346.1-201ENST00000569208 867 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 AC012254.5-201ENST00000623573 478 ntBASIC7.06□□□□□ -1.28
DDX39AO00148 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.06□□□□□ -1.28
DDX39AO00148 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DDX39AO00148 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DDX39AO00148 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DDX39AO00148 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
DDX39AO00148 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.05□□□□□ -1.28
DDX39AO00148 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
DDX39AO00148 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
DDX39AO00148 AC104966.1-201ENST00000467010 1464 ntBASIC7.05□□□□□ -1.28
DDX39AO00148 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DDX39AO00148 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.05□□□□□ -1.28
DDX39AO00148 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DDX39AO00148 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
DDX39AO00148 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.05□□□□□ -1.28
DDX39AO00148 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DDX39AO00148 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DDX39AO00148 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
DDX39AO00148 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DDX39AO00148 AL049634.1-201ENST00000453770 1720 ntBASIC7.05□□□□□ -1.28
DDX39AO00148 AC078880.4-201ENST00000617627 1749 ntBASIC7.05□□□□□ -1.28
DDX39AO00148 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DDX39AO00148 AC007114.2-201ENST00000576014 4281 ntBASIC7.05□□□□□ -1.28
DDX39AO00148 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
DDX39AO00148 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
DDX39AO00148 RN7SKP240-201ENST00000410583 375 ntBASIC7.05□□□□□ -1.28
DDX39AO00148 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.05□□□□□ -1.28
DDX39AO00148 UBE2V1P14-201ENST00000415815 558 ntBASIC7.05□□□□□ -1.28
DDX39AO00148 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC7.05□□□□□ -1.28
DDX39AO00148 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.05□□□□□ -1.28
DDX39AO00148 AC110602.1-201ENST00000437414 318 ntBASIC7.05□□□□□ -1.28
DDX39AO00148 OR52I1-201ENST00000450052 1050 ntBASIC7.05□□□□□ -1.28
DDX39AO00148 HIGD1AP16-201ENST00000450986 258 ntBASIC7.05□□□□□ -1.28
DDX39AO00148 Z83838.1-202ENST00000456225 839 ntBASIC7.05□□□□□ -1.28
DDX39AO00148 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.05□□□□□ -1.28
DDX39AO00148 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
DDX39AO00148 TOMM20P1-201ENST00000534518 427 ntBASIC7.05□□□□□ -1.28
DDX39AO00148 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.05□□□□□ -1.28
DDX39AO00148 AC233702.7-202ENST00000582941 211 ntBASIC7.05□□□□□ -1.28
DDX39AO00148 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms