Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 SNORA64.3-201ENST00000365647 134 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 SNORA70H-201ENST00000383910 135 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 SNORA70J-201ENST00000384182 135 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AL445238.1-204ENST00000400311 463 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 RN7SL326P-201ENST00000477493 296 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 SNRPCP11-201ENST00000492453 205 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 KHDC1P1-201ENST00000511053 508 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 RPA2P3-201ENST00000533268 770 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 OR4A6P-201ENST00000534364 970 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 OR4H6P-201ENST00000563771 921 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AC027229.1-201ENST00000583887 253 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AC063977.7-201ENST00000594454 337 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AL021368.3-201ENST00000607119 578 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AC006924.1-201ENST00000610750 559 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AL137246.2-201ENST00000613439 662 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AL031658.2-201ENST00000616850 651 ntBASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPB9F8W1W9 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AOX3P-204ENST00000491025 2107 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 MIR433-201ENST00000384837 93 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AL157702.1-201ENST00000398764 426 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC112492.2-201ENST00000432774 1030 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 SOCS5P1-201ENST00000440415 949 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC092601.1-201ENST00000444526 383 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 CEACAMP11-201ENST00000455211 583 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 VPS25P1-201ENST00000455691 508 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 RBMY2HP-201ENST00000457961 720 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 RN7SL39P-201ENST00000462264 297 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 OR4D12P-201ENST00000509361 911 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC138517.1-201ENST00000515724 568 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 SNORA74.1-201ENST00000516320 180 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 CYCSP25-201ENST00000525280 316 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 RN7SL66P-201ENST00000582099 264 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AC010998.3-201ENST00000613871 631 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 AL354950.1-201ENST00000614150 568 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.78□□□□□ -1.48
NPIPB9F8W1W9 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms