Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 RN7SKP67-201ENST00000515905 235 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 AC008055.1-201ENST00000547032 609 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 RNU4ATAC-201ENST00000580972 127 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 MIR132-201ENST00000591554 101 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 U1.25-201ENST00000614085 162 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 U1.34-201ENST00000618578 162 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 U1.31-201ENST00000620022 160 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 AL137067.2-201ENST00000621202 131 ntBASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRAV27A0A087WT01 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AC024587.1-201ENST00000505925 2157 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 RN7SKP257-201ENST00000364525 309 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 SNORD94-201ENST00000386037 137 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 RPL23AP17-201ENST00000401064 499 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AL354707.3-201ENST00000427308 331 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 OR6R1P-201ENST00000431838 940 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 SOCS5P1-201ENST00000440415 949 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 GAPDHP23-201ENST00000444823 993 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 PPIAP32-201ENST00000449940 472 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 RN7SL39P-201ENST00000462264 297 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 RN7SL326P-201ENST00000477493 296 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AL035690.1-201ENST00000490892 383 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 OR4D12P-201ENST00000509361 911 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 RNA5SP206-201ENST00000516703 121 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AC135983.3-201ENST00000528049 1226 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AL589765.6-201ENST00000601909 549 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AC004890.3-201ENST00000605566 1095 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AC022106.1-201ENST00000612834 766 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 AC010998.3-201ENST00000613871 631 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 MAPK10-270ENST00000641102 3538 ntBASIC5.59□□□□□ -1.51
TRAV27A0A087WT01 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRAV27A0A087WT01 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.59□□□□□ -1.52
TRAV27A0A087WT01 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
TRAV27A0A087WT01 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.59□□□□□ -1.52
TRAV27A0A087WT01 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRAV27A0A087WT01 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.59□□□□□ -1.52
TRAV27A0A087WT01 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRAV27A0A087WT01 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TRAV27A0A087WT01 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AC007159.1-201ENST00000566529 4706 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 AL359091.1-201ENST00000449048 1734 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 RNU1-49P-201ENST00000363468 159 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 RNA5SP485-201ENST00000365053 119 ntBASIC5.58□□□□□ -1.52
TRAV27A0A087WT01 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms