Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM17Q9Y577 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
TRIM17Q9Y577 AC020658.2-201ENST00000559030 4020 ntBASIC7.36□□□□□ -1.23
TRIM17Q9Y577 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.36□□□□□ -1.23
TRIM17Q9Y577 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AC092725.2-201ENST00000567658 1389 ntBASIC7.35□□□□□ -1.23
TRIM17Q9Y577 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 TMSB4XP2-201ENST00000335179 210 ntBASIC7.35□□□□□ -1.23
TRIM17Q9Y577 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 RN7SKP216-201ENST00000411050 312 ntBASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AL355433.1-201ENST00000422804 300 ntBASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AL627308.1-201ENST00000435693 821 ntBASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AP000281.1-201ENST00000444036 316 ntBASIC7.35□□□□□ -1.23
TRIM17Q9Y577 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 RPS27AP2-201ENST00000457576 465 ntBASIC7.35□□□□□ -1.23
TRIM17Q9Y577 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 RPS10P20-201ENST00000494130 463 ntBASIC7.35□□□□□ -1.23
TRIM17Q9Y577 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 ULK4P2-202ENST00000564187 492 ntBASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AC073488.2-201ENST00000631903 751 ntBASIC7.35□□□□□ -1.23
TRIM17Q9Y577 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 MROH3P-201ENST00000435735 2676 ntBASIC7.35□□□□□ -1.23
TRIM17Q9Y577 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 Z83820.1-201ENST00000456978 1499 ntBASIC7.35□□□□□ -1.23
TRIM17Q9Y577 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
TRIM17Q9Y577 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 AC136624.1-201ENST00000400791 413 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 IGKV1OR2-3-201ENST00000411475 288 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 NIPA2P1-201ENST00000426223 976 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 NANOGP4-201ENST00000427230 913 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 NPM1P22-201ENST00000427761 952 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 AP006222.1-205ENST00000450734 457 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 CFL1P4-201ENST00000451536 498 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 EIF3LP3-201ENST00000495197 822 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 KHDC1P1-201ENST00000511053 508 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 NATP-201ENST00000523491 878 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 RPA2P1-201ENST00000556557 721 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 AC068768.2-201ENST00000602352 343 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 AC005277.2-201ENST00000617898 390 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 AC018692.2-201ENST00000624130 348 ntBASIC7.34□□□□□ -1.23
TRIM17Q9Y577 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
TRIM17Q9Y577 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.24
TRIM17Q9Y577 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.34□□□□□ -1.24
TRIM17Q9Y577 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
TRIM17Q9Y577 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
TRIM17Q9Y577 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM17Q9Y577 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM17Q9Y577 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM17Q9Y577 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM17Q9Y577 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM17Q9Y577 CASC19-243ENST00000641588 1546 ntBASIC7.33□□□□□ -1.24
TRIM17Q9Y577 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.33□□□□□ -1.24
TRIM17Q9Y577 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM17Q9Y577 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
TRIM17Q9Y577 PRNCR1-201ENST00000635449 12727 ntBASIC7.33□□□□□ -1.24
TRIM17Q9Y577 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
TRIM17Q9Y577 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.33□□□□□ -1.24
TRIM17Q9Y577 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms