Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC069240.2-201ENST00000550242 609 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC024085.1-201ENST00000604299 432 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AL590032.1-201ENST00000604920 252 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AL136097.3-201ENST00000611097 505 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 OR2A3P-202ENST00000641249 1776 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC239868.2-201ENST00000564237 4527 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 OR5M2P-202ENST00000641241 4242 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 CCNT2P1-201ENST00000423082 1315 ntBASIC5.69□□□□□ -1.5
HMG20AQ9NP66 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.69□□□□□ -1.5
HMG20AQ9NP66 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 ZNF806-201ENST00000438300 1774 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AL080312.1-201ENST00000256654 824 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 MIR99A-201ENST00000384906 81 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 RNA5SP176-201ENST00000390956 110 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 U3.43-201ENST00000410734 213 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 SPATA20P1-201ENST00000423089 438 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 PUDPP2-201ENST00000431423 643 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 RPL7AP71-201ENST00000451120 739 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 RPL23AP64-201ENST00000469465 435 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 RN7SL390P-201ENST00000470634 284 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AF305872.1-201ENST00000485217 471 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 RPL21P42-201ENST00000488408 464 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AC008945.1-201ENST00000505144 499 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 RPL7L1P7-201ENST00000509986 724 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 CYP4F27P-201ENST00000514557 494 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 HNRNPCP8-201ENST00000528764 888 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AC140063.1-201ENST00000541343 259 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AC106782.7-201ENST00000624024 418 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AC114546.4-201ENST00000624413 369 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AC133555.5-201ENST00000624430 418 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AC243725.1-201ENST00000637164 436 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 AC079776.5-201ENST00000641920 211 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 QRSL1P3-201ENST00000552666 1316 ntBASIC5.68□□□□□ -1.5
HMG20AQ9NP66 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
HMG20AQ9NP66 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 TRIM53CP-201ENST00000531490 1354 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 AC114774.1-201ENST00000507410 1770 ntBASIC5.67□□□□□ -1.5
HMG20AQ9NP66 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
HMG20AQ9NP66 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms