Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC4.21□□□□□ -1.74
SND1-IT1Q9HBX3 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SND1-IT1Q9HBX3 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SND1-IT1Q9HBX3 KYNUP3-201ENST00000574386 1341 ntBASIC4.21□□□□□ -1.74
SND1-IT1Q9HBX3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AL592429.1-201ENST00000403909 1473 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC087516.1-201ENST00000561236 2428 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC114876.1-201ENST00000490962 1366 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 TRIM53CP-201ENST00000531490 1354 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AL138847.1-201ENST00000258651 546 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 SNORD1C-201ENST00000363315 78 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 RNU11-6P-201ENST00000391127 133 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 RPSAP44-201ENST00000406712 884 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AL136100.1-201ENST00000407696 330 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AL354868.1-201ENST00000417077 482 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 OSTCP2-201ENST00000437956 444 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC083855.1-201ENST00000440041 258 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 GAPDHP20-201ENST00000444107 1007 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AL161722.1-201ENST00000446972 1032 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 RN7SL91P-201ENST00000469313 291 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC126615.1-201ENST00000470084 630 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 OR2A3P-201ENST00000493774 953 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC069240.2-201ENST00000550242 609 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC009120.3-201ENST00000563335 499 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 RN7SL208P-201ENST00000577964 296 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC093635.1-201ENST00000609028 555 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 MRPL57P3-201ENST00000619218 176 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AC005753.1-201ENST00000623837 618 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 OR7E91P-202ENST00000642062 1198 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AL442128.2-201ENST00000620246 1824 ntBASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SND1-IT1Q9HBX3 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 RNA5SP321-201ENST00000362722 111 ntBASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 AL451061.1-201ENST00000407887 862 ntBASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 RN7SKP129-201ENST00000410288 299 ntBASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 RN7SKP137-201ENST00000411074 307 ntBASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 SMC4P1-201ENST00000414479 527 ntBASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 MRPS21P5-201ENST00000417885 231 ntBASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 RPS21P1-201ENST00000434479 247 ntBASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC4.19□□□□□ -1.74
SND1-IT1Q9HBX3 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms