Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 MARK2P12-201ENST00000420129 585 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 RPL12P43-201ENST00000420608 499 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC018804.1-201ENST00000430381 618 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 RPL14P5-201ENST00000436474 730 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC096632.2-201ENST00000438139 1239 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 ELOCP3-201ENST00000439303 348 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 TXNP2-201ENST00000443918 295 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 YRDCP3-201ENST00000456507 480 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC019084.1-201ENST00000457337 432 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 GAPDHP53-201ENST00000458397 924 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 CBX5P1-201ENST00000468470 561 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 TUBBP11-201ENST00000472255 252 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC025271.1-201ENST00000485045 429 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 OR2A3P-201ENST00000493774 953 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 RNU6-943P-201ENST00000516960 98 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 RN7SL199P-201ENST00000578752 281 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 RN7SL656P-201ENST00000579044 281 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 RN7SL404P-201ENST00000582421 281 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AL445649.1-201ENST00000615941 691 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AL161420.1-201ENST00000619393 264 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AP003499.2-201ENST00000624100 483 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AC004808.1-201ENST00000627671 721 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 Z97989.1-201ENST00000531702 2421 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 AP002833.3-201ENST00000625075 2265 ntBASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
AMBRA1Q9C0C7 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 RNU6-650P-201ENST00000365658 111 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AL662791.3-201ENST00000413771 776 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 RPL24P2-201ENST00000421023 475 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 MTND4P24-201ENST00000424002 397 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AL512637.2-201ENST00000431287 1256 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC005517.1-201ENST00000452091 489 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC068587.2-201ENST00000478386 781 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 RN7SL187P-201ENST00000495587 303 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 AC096571.1-202ENST00000506634 735 ntBASIC6.28□□□□□ -1.4
AMBRA1Q9C0C7 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms