Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.58□□□□□ -1.36
TRIM54Q9BYV2 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC009501.3-201ENST00000605001 1352 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC009779.8-201ENST00000641684 4384 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 RNA5SP302-201ENST00000364896 100 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 RNA5SP35-201ENST00000391257 129 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 RN7SKP296-201ENST00000411185 341 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AL590128.1-201ENST00000433407 286 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 MTND2P21-201ENST00000436242 1042 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AL158214.1-201ENST00000444423 404 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC093663.2-201ENST00000484625 313 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 OR9N1P-202ENST00000494289 481 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 H3F3AP3-201ENST00000497682 407 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC105391.1-201ENST00000503155 1045 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC073648.3-201ENST00000504939 925 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AK4P6-201ENST00000505168 528 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC091849.1-201ENST00000509920 121 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 RBMS2P1-201ENST00000525031 1226 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC068339.2-201ENST00000534395 618 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC091304.4-201ENST00000565703 620 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC106785.4-201ENST00000569492 412 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AP001496.3-201ENST00000580230 913 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AL354718.1-201ENST00000619764 589 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AL138955.1-201ENST00000622881 1040 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AP000943.4-201ENST00000622912 357 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AC063952.1-203ENST00000634410 658 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 OR10AB1P-202ENST00000641219 1686 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 AL139384.2-201ENST00000613809 3590 ntBASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM54Q9BYV2 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 RACGAP1P-201ENST00000550663 1879 ntBASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 CR382285.2-201ENST00000624662 1495 ntBASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 SNORA72.3-201ENST00000365074 132 ntBASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 UBBP1-201ENST00000392399 473 ntBASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 LDHAP5-201ENST00000394996 622 ntBASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 AL451061.1-201ENST00000407887 862 ntBASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 RN7SKP188-201ENST00000410789 317 ntBASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 AL359885.1-201ENST00000415786 903 ntBASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 PPIAP23-201ENST00000420099 497 ntBASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 SFR1P2-201ENST00000421841 730 ntBASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 ZNF965P-201ENST00000432501 817 ntBASIC6.56□□□□□ -1.36
TRIM54Q9BYV2 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms