Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MTCO1P56-201ENST00000401674 224 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AL161631.1-201ENST00000417933 486 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 Z99497.1-201ENST00000421282 135 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 CYCSP46-201ENST00000423569 204 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 MTCYBP6-201ENST00000441810 138 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 SPRYD7P1-201ENST00000443861 570 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 CDC42P1-201ENST00000456658 548 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC079193.1-201ENST00000460497 588 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC008410.1-201ENST00000483777 339 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC096576.1-201ENST00000489014 359 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 RNF138P1-201ENST00000502765 546 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC093677.1-201ENST00000514414 678 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 RNU6-264P-201ENST00000517134 104 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 OR5G1P-201ENST00000525221 946 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC006512.2-201ENST00000543250 486 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC007954.1-201ENST00000554198 494 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AL591767.2-201ENST00000554984 173 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC116553.2-201ENST00000564203 463 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC092354.1-201ENST00000606057 376 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AL357080.1-201ENST00000617394 239 ntBASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 SYT6-202ENST00000607941 4352 ntTSL 2 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC7.87□□□□□ -1.15
COL25A1Q9BXS0 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 CARD8-216ENST00000520153 2617 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 SEC16B-204ENST00000464631 2948 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC245060.6-201ENST00000624350 8420 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 ARFIP1-205ENST00000451320 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 Z95114.3-201ENST00000624395 1921 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 NEK2P4-201ENST00000425793 1329 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 RASSF4-201ENST00000340258 3641 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 NR2C1-202ENST00000333003 4143 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 Y_RNA.356-201ENST00000365475 113 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 Y_RNA.453-201ENST00000384223 109 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 MIR99A-201ENST00000384906 81 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 RPSAP72-201ENST00000407020 358 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 RN7SKP285-201ENST00000410137 318 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 RNU6-757P-201ENST00000410334 100 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 RN7SKP268-201ENST00000411107 316 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 TIMM8AP1-201ENST00000419283 295 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 MOB1AP1-201ENST00000430903 535 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AC104850.1-201ENST00000435940 476 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 Z80107.2-201ENST00000445127 392 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 MRPL35P2-201ENST00000448009 511 ntBASIC7.86□□□□□ -1.15
COL25A1Q9BXS0 Z99127.3-201ENST00000448158 395 ntBASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms