Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC091849.1-201ENST00000509920 121 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 RBMS2P1-201ENST00000525031 1226 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 AP001804.1-201ENST00000526868 919 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 SNRPCP6-201ENST00000528310 210 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 AP004607.5-201ENST00000532034 217 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 AP003115.1-201ENST00000569849 463 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 AL078624.2-201ENST00000605063 554 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC067838.1-201ENST00000606064 577 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 PTCHD3P1-201ENST00000612350 537 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC004836.1-201ENST00000623032 634 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC243960.7-201ENST00000623532 707 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC073869.7-201ENST00000640874 297 ntBASIC5.89□□□□□ -1.47
PTP4A1Q93096 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTP4A1Q93096 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.89□□□□□ -1.47
PTP4A1Q93096 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTP4A1Q93096 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTP4A1Q93096 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTP4A1Q93096 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTP4A1Q93096 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTP4A1Q93096 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTP4A1Q93096 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTP4A1Q93096 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 MIR27A-201ENST00000385073 78 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 RNU11-201ENST00000387069 134 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 UBBP1-201ENST00000392399 473 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 AL451046.1-201ENST00000406097 534 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 MRPL32P1-201ENST00000406301 247 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 RNA5SP231-201ENST00000410496 138 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC007568.1-201ENST00000422912 471 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC021876.1-201ENST00000425959 359 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 MTND1P10-201ENST00000426108 832 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC009237.1-201ENST00000442127 744 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 PFN1P11-201ENST00000445829 389 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 CARSP2-201ENST00000520688 277 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 MIR378C-201ENST00000578683 81 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 AL360012.1-201ENST00000602813 131 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 AL512430.4-201ENST00000603085 613 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 Z93930.3-201ENST00000607919 749 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 OR7M1P-201ENST00000608946 533 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 AL356608.1-201ENST00000610034 820 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 MIR8082-201ENST00000612488 81 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 AL137246.2-201ENST00000613439 662 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 MRPL57P3-201ENST00000619218 176 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC061999.1-201ENST00000624454 177 ntBASIC5.88□□□□□ -1.47
PTP4A1Q93096 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTP4A1Q93096 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTP4A1Q93096 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTP4A1Q93096 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTP4A1Q93096 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.88□□□□□ -1.47
PTP4A1Q93096 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 AC011815.2-201ENST00000618230 2021 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 AP005432.1-201ENST00000580891 3485 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTP4A1Q93096 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PTP4A1Q93096 RNA5SP350-201ENST00000363298 111 ntBASIC5.87□□□□□ -1.47
PTP4A1Q93096 SNORD8-201ENST00000363915 110 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms