Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 OR11H13P-201ENST00000359695 979 ntBASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 LCN1P2-201ENST00000372030 223 ntBASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 CT45A11P-201ENST00000448043 1134 ntBASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 RN7SL714P-201ENST00000487050 298 ntBASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 AC018717.1-201ENST00000457712 1505 ntBASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 AC010329.1-201ENST00000593903 8328 ntBASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 Z82209.2-201ENST00000623410 2012 ntBASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 RNA5SP251-201ENST00000410614 137 ntBASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 AC066692.1-201ENST00000421721 457 ntBASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 AC073594.1-201ENST00000462065 364 ntBASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.46□□□□□ -1.37
SHROOM3Q8TF72 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 AP001541.1-201ENST00000623322 1904 ntBASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 RNF145-205ENST00000518802 2603 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 SLC20A1P1-201ENST00000413906 956 ntBASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 AC068228.1-201ENST00000461723 211 ntBASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 RPS26P39-201ENST00000469206 341 ntBASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 AC006512.2-201ENST00000543250 486 ntBASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHROOM3Q8TF72 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 RNA5SP485-201ENST00000365053 119 ntBASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 PSMA6P1-201ENST00000400275 741 ntBASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 AL035422.1-201ENST00000414193 397 ntBASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 Z93019.1-201ENST00000416450 973 ntBASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 AL139415.1-201ENST00000424862 352 ntBASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 OR4D12P-201ENST00000509361 911 ntBASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 AC090022.1-201ENST00000546569 311 ntBASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.45□□□□□ -1.38
SHROOM3Q8TF72 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms