Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE4Q8N205 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE4Q8N205 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE4Q8N205 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE4Q8N205 RNF19BPY-201ENST00000458209 1550 ntBASIC7.88□□□□□ -1.15
SYNE4Q8N205 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE4Q8N205 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SYNE4Q8N205 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE4Q8N205 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE4Q8N205 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE4Q8N205 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE4Q8N205 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE4Q8N205 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 AL117378.2-201ENST00000622916 1337 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE4Q8N205 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE4Q8N205 RNFT1P3-201ENST00000340898 1052 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 MIR323A-201ENST00000362199 86 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 RNA5SP284-201ENST00000384547 118 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 AL096711.1-201ENST00000404780 554 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 AL023284.3-201ENST00000407767 334 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 AL161636.2-201ENST00000445179 927 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 AC006539.1-201ENST00000481419 501 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 SETP12-201ENST00000514068 805 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 SNORA48.9-201ENST00000516419 162 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 AP000662.1-201ENST00000530952 487 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 AC027544.3-201ENST00000535082 757 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 AC090022.1-201ENST00000546569 311 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE4Q8N205 AC010998.3-201ENST00000613871 631 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 AC126175.1-201ENST00000617041 758 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 AC119674.1-217ENST00000641942 1086 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 ZSWIM5P3-201ENST00000511265 2743 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE4Q8N205 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE4Q8N205 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 AC010401.2-201ENST00000575137 4934 ntBASIC7.87□□□□□ -1.15
SYNE4Q8N205 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNE4Q8N205 AC008627.1-201ENST00000517511 1704 ntBASIC7.86□□□□□ -1.15
SYNE4Q8N205 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 AC010624.4-201ENST00000597606 1351 ntBASIC7.86□□□□□ -1.15
SYNE4Q8N205 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 RNA5SP178-201ENST00000410380 128 ntBASIC7.86□□□□□ -1.15
SYNE4Q8N205 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 VPS25P1-201ENST00000455691 508 ntBASIC7.86□□□□□ -1.15
SYNE4Q8N205 AC092824.1-201ENST00000483524 576 ntBASIC7.86□□□□□ -1.15
SYNE4Q8N205 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 CR383658.1-201ENST00000514609 734 ntBASIC7.86□□□□□ -1.15
SYNE4Q8N205 IGLV3-6-201ENST00000523937 250 ntBASIC7.86□□□□□ -1.15
SYNE4Q8N205 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 AP001858.2-201ENST00000536213 601 ntBASIC7.86□□□□□ -1.15
SYNE4Q8N205 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 AC020978.7-201ENST00000575953 1187 ntBASIC7.86□□□□□ -1.15
SYNE4Q8N205 AC015818.6-201ENST00000584274 634 ntBASIC7.86□□□□□ -1.15
SYNE4Q8N205 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.86□□□□□ -1.15
SYNE4Q8N205 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 AC062029.1-202ENST00000606164 3651 ntBASIC7.86□□□□□ -1.15
SYNE4Q8N205 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE4Q8N205 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms