Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNU6-549P-201ENST00000384433 107 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC010385.1-201ENST00000412374 256 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AL008987.1-201ENST00000415528 237 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 VDAC1P10-201ENST00000416715 891 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AL356320.2-201ENST00000417263 507 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC009518.2-201ENST00000418056 731 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AL593856.1-201ENST00000419949 805 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 Z82198.3-201ENST00000421145 199 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC097721.1-201ENST00000427150 1253 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 EMC3-AS1-205ENST00000438698 534 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC002542.1-201ENST00000440683 193 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 GTF2IP14-201ENST00000441415 586 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 RPL31P11-202ENST00000454082 372 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC239798.3-201ENST00000454459 408 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AL591122.1-201ENST00000487348 492 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC073610.1-201ENST00000489971 396 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 RN7SL350P-201ENST00000492591 299 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 DCAF13P2-201ENST00000514188 555 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC023813.2-201ENST00000564321 469 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 CYP2C60P-201ENST00000566088 139 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC010287.1-201ENST00000566916 357 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 ATP5F1P7-201ENST00000567330 760 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC096708.2-201ENST00000577676 512 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AL121809.2-201ENST00000613169 341 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 AC004014.2-201ENST00000623718 5122 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 VN2R3P-201ENST00000422626 1412 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 Z97832.2-201ENST00000605896 4261 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 ZNF733P-202ENST00000444809 1573 ntBASIC7.84□□□□□ -1.15
NPAS4Q8IUM7 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
NPAS4Q8IUM7 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.16
NPAS4Q8IUM7 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
NPAS4Q8IUM7 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AC127502.2-201ENST00000602663 2351 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 RNU5A-2P-201ENST00000384337 116 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 MIR152-201ENST00000385212 87 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AL136100.1-201ENST00000407696 330 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 SNORA11.5-201ENST00000408163 128 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 RNU2-18P-201ENST00000411224 162 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 RAC1P4-201ENST00000419413 579 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 SNRPEP5-201ENST00000425442 278 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 MTCO3P30-201ENST00000426425 670 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 CALM1P2-201ENST00000452941 448 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 GAPDHP53-201ENST00000458397 924 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 RN7SL741P-201ENST00000482473 289 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AC093890.1-201ENST00000502554 540 ntBASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.83□□□□□ -1.16
NPAS4Q8IUM7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms