Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
C11orf88Q6PI97 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
C11orf88Q6PI97 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
C11orf88Q6PI97 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
C11orf88Q6PI97 AC007342.9-201ENST00000623877 1385 ntBASIC5.8□□□□□ -1.48
C11orf88Q6PI97 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC068769.1-201ENST00000474767 2426 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC010132.2-201ENST00000295493 1043 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 RN7SKP184-201ENST00000362348 333 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 SNORA70.8-201ENST00000384231 136 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 MIR138-2-201ENST00000384916 84 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 RNA5SP105-201ENST00000391123 113 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 TRIM60P17-201ENST00000415181 719 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AL627308.2-201ENST00000420014 432 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AJ239321.1-201ENST00000424255 564 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 RPL29P7-201ENST00000440227 457 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 RAB28P3-201ENST00000448325 597 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC093799.1-201ENST00000452411 499 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AL356390.1-201ENST00000455684 397 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 WBP1LP1-201ENST00000460451 896 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 RN7SL267P-201ENST00000485107 261 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 OR52A4P-203ENST00000498233 1014 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AK4P6-201ENST00000505168 528 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 SNORA58-201ENST00000505219 137 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 CFI-204ENST00000510800 667 ntTSL 2 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AP003084.1-201ENST00000524828 742 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 KCTD9P4-201ENST00000526766 1166 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC233290.1-201ENST00000553021 1186 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 FAM106CP-201ENST00000582212 507 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 RPSAP66-201ENST00000592196 606 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AL953862.2-201ENST00000603089 820 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC113361.1-201ENST00000606683 543 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AL031777.2-201ENST00000611953 196 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 U1.41-201ENST00000617626 165 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC078909.2-201ENST00000620584 398 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC211433.3-201ENST00000623770 375 ntBASIC5.79□□□□□ -1.48
C11orf88Q6PI97 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
C11orf88Q6PI97 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AC026523.2-201ENST00000625039 7739 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AL731556.1-201ENST00000394628 3711 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms