Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 AOX3P-204ENST00000491025 2107 ntBASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 AL731532.1-201ENST00000623972 4236 ntBASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
ANKRD55Q3KP44 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 RNU6-1331P-201ENST00000363658 106 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 RNA5SP114-201ENST00000363780 113 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 GNG5P2-201ENST00000372054 207 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC074375.1-201ENST00000372993 192 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 RNU1-56P-201ENST00000391303 164 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 U3.43-201ENST00000410734 213 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC007562.1-201ENST00000421819 517 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 SPATA20P1-201ENST00000423089 438 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 GAPDHP69-201ENST00000425504 1008 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 BX005266.3-201ENST00000443013 1075 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC023274.2-201ENST00000445264 521 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC239798.3-201ENST00000454459 408 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 RN7SL776P-201ENST00000493390 268 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 DCAF13P2-201ENST00000514188 555 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 SNORD116-30-201ENST00000516468 85 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 IGLC4-201ENST00000517690 248 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 LINC00556-201ENST00000569603 412 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC010615.3-201ENST00000597319 394 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC125494.2-201ENST00000602431 657 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC092960.1-201ENST00000604762 351 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC009283.1-201ENST00000615852 645 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC017037.4-201ENST00000624526 826 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC140479.4-205ENST00000636339 820 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AC011455.2-201ENST00000599320 3336 ntBASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ANKRD55Q3KP44 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms