Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC4.49□□□□□ -1.69
CKS1BP61024 CHCHD3P1-201ENST00000425516 676 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 AC007365.2-201ENST00000428806 458 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC4.49□□□□□ -1.69
CKS1BP61024 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC4.49□□□□□ -1.69
CKS1BP61024 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC4.49□□□□□ -1.69
CKS1BP61024 RPL22P11-201ENST00000434894 385 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 AL663074.2-201ENST00000440621 479 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC4.49□□□□□ -1.69
CKS1BP61024 GOT2P2-201ENST00000450663 1251 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.49□□□□□ -1.69
CKS1BP61024 SULT1D1P-201ENST00000458020 882 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 RN7SL815P-201ENST00000470970 290 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 RN7SL182P-201ENST00000496499 300 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC4.49□□□□□ -1.69
CKS1BP61024 SCARNA18.2-201ENST00000516882 84 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 IGHV3-57-201ENST00000520143 280 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC4.49□□□□□ -1.69
CKS1BP61024 RBMS2P1-201ENST00000525031 1226 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 PHBP2-201ENST00000532859 806 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC4.49□□□□□ -1.69
CKS1BP61024 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC4.49□□□□□ -1.69
CKS1BP61024 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CKS1BP61024 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC4.49□□□□□ -1.69
CKS1BP61024 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC4.49□□□□□ -1.69
CKS1BP61024 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC4.49□□□□□ -1.69
CKS1BP61024 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC4.49□□□□□ -1.69
CKS1BP61024 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.49□□□□□ -1.69
CKS1BP61024 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC4.49□□□□□ -1.69
CKS1BP61024 SNRPCP20-201ENST00000588011 210 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 AC011447.2-201ENST00000592921 283 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CKS1BP61024 pRNA.9-201ENST00000618609 89 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 PART1_3.1-201ENST00000619680 131 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 AC012653.2-201ENST00000621880 420 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 AC013489.3-201ENST00000623274 517 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC4.49□□□□□ -1.69
CKS1BP61024 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CKS1BP61024 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.49□□□□□ -1.69
CKS1BP61024 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CKS1BP61024 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC4.49□□□□□ -1.69
CKS1BP61024 AL359955.1-201ENST00000455242 3275 ntBASIC4.49□□□□□ -1.69
CKS1BP61024 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC4.49□□□□□ -1.69
CKS1BP61024 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.49□□□□□ -1.69
CKS1BP61024 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.49□□□□□ -1.69
CKS1BP61024 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CKS1BP61024 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CKS1BP61024 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CKS1BP61024 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.48□□□□□ -1.69
CKS1BP61024 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CKS1BP61024 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CKS1BP61024 EEF1A1P12-201ENST00000443590 1346 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CKS1BP61024 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CKS1BP61024 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.48□□□□□ -1.69
CKS1BP61024 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CKS1BP61024 CASC19-228ENST00000641414 1684 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CKS1BP61024 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CKS1BP61024 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CKS1BP61024 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CKS1BP61024 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CKS1BP61024 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.48□□□□□ -1.69
CKS1BP61024 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
CKS1BP61024 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CKS1BP61024 AC002525.1-201ENST00000624392 1622 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CKS1BP61024 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CKS1BP61024 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CKS1BP61024 RNU12-2P-201ENST00000364789 156 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 RPS3AP5-201ENST00000389400 821 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 AL035467.1-201ENST00000403583 686 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 RNA5SP431-201ENST00000410312 120 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC4.48□□□□□ -1.69
CKS1BP61024 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC4.48□□□□□ -1.69
CKS1BP61024 AC093107.1-201ENST00000422772 609 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 AC092066.1-201ENST00000425131 317 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 AC092651.1-201ENST00000426110 312 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 EIF4A1P5-201ENST00000428062 1095 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 AC018804.1-201ENST00000430381 618 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC4.48□□□□□ -1.69
CKS1BP61024 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC4.48□□□□□ -1.69
CKS1BP61024 NMNAT1P3-201ENST00000457517 888 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 RN7SL308P-201ENST00000464971 297 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC4.48□□□□□ -1.69
CKS1BP61024 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.48□□□□□ -1.69
CKS1BP61024 AC020779.1-201ENST00000478757 796 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 RN7SL282P-201ENST00000479676 297 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 TAAR3P-202ENST00000481759 1025 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 AC083906.1-201ENST00000509298 406 ntBASIC4.48□□□□□ -1.69
CKS1BP61024 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.48□□□□□ -1.69
CKS1BP61024 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms