Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.99□□□□□ -1.45
CDH12P55289 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH12P55289 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH12P55289 AL121579.2-201ENST00000555466 590 ntBASIC5.99□□□□□ -1.45
CDH12P55289 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.99□□□□□ -1.45
CDH12P55289 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH12P55289 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH12P55289 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH12P55289 WBP1LP11-201ENST00000586141 328 ntBASIC5.99□□□□□ -1.45
CDH12P55289 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH12P55289 WBP1LP8-201ENST00000617401 327 ntBASIC5.99□□□□□ -1.45
CDH12P55289 AL035425.4-201ENST00000624509 1063 ntBASIC5.99□□□□□ -1.45
CDH12P55289 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH12P55289 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH12P55289 AC110373.1-201ENST00000505994 3505 ntBASIC5.99□□□□□ -1.45
CDH12P55289 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH12P55289 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH12P55289 OR5M2P-202ENST00000641241 4242 ntBASIC5.98□□□□□ -1.45
CDH12P55289 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CDH12P55289 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH12P55289 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CDH12P55289 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH12P55289 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH12P55289 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.98□□□□□ -1.45
CDH12P55289 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH12P55289 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH12P55289 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH12P55289 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.98□□□□□ -1.45
CDH12P55289 RNA5SP355-201ENST00000365317 135 ntBASIC5.98□□□□□ -1.45
CDH12P55289 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH12P55289 AL451046.1-201ENST00000406097 534 ntBASIC5.98□□□□□ -1.45
CDH12P55289 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH12P55289 RNU6-564P-201ENST00000410983 104 ntBASIC5.98□□□□□ -1.45
CDH12P55289 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH12P55289 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH12P55289 AL590623.1-201ENST00000427864 105 ntBASIC5.98□□□□□ -1.45
CDH12P55289 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH12P55289 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH12P55289 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH12P55289 AC115223.1-201ENST00000466377 870 ntBASIC5.98□□□□□ -1.45
CDH12P55289 AC099340.1-201ENST00000475247 599 ntBASIC5.98□□□□□ -1.45
CDH12P55289 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH12P55289 RPL7AP30-201ENST00000482859 796 ntBASIC5.98□□□□□ -1.45
CDH12P55289 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH12P55289 AC096661.1-201ENST00000515870 822 ntBASIC5.98□□□□□ -1.45
CDH12P55289 SNORA70.17-201ENST00000516449 133 ntBASIC5.98□□□□□ -1.45
CDH12P55289 AC008429.2-201ENST00000523057 864 ntBASIC5.98□□□□□ -1.45
CDH12P55289 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH12P55289 OR4A46P-201ENST00000527255 933 ntBASIC5.98□□□□□ -1.45
CDH12P55289 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH12P55289 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH12P55289 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH12P55289 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.98□□□□□ -1.45
CDH12P55289 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH12P55289 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH12P55289 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH12P55289 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH12P55289 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.98□□□□□ -1.45
CDH12P55289 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH12P55289 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.98□□□□□ -1.45
CDH12P55289 AC010998.3-201ENST00000613871 631 ntBASIC5.98□□□□□ -1.45
CDH12P55289 MIR6737-201ENST00000617385 70 ntBASIC5.98□□□□□ -1.45
CDH12P55289 AC127071.2-201ENST00000623293 527 ntBASIC5.98□□□□□ -1.45
CDH12P55289 AC117503.3-201ENST00000623811 601 ntBASIC5.98□□□□□ -1.45
CDH12P55289 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH12P55289 AC073488.9-201ENST00000631601 754 ntBASIC5.98□□□□□ -1.45
CDH12P55289 AC027559.1-201ENST00000636288 271 ntBASIC5.98□□□□□ -1.45
CDH12P55289 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH12P55289 AC027279.1-201ENST00000568885 4284 ntBASIC5.98□□□□□ -1.45
CDH12P55289 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH12P55289 AC078880.4-201ENST00000617627 1749 ntBASIC5.98□□□□□ -1.45
CDH12P55289 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CDH12P55289 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH12P55289 AL353763.1-201ENST00000624467 1628 ntBASIC5.98□□□□□ -1.45
CDH12P55289 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH12P55289 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH12P55289 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CDH12P55289 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH12P55289 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CDH12P55289 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CDH12P55289 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
CDH12P55289 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CDH12P55289 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.98□□□□□ -1.45
CDH12P55289 AC126474.2-201ENST00000623268 1750 ntBASIC5.98□□□□□ -1.45
CDH12P55289 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.98□□□□□ -1.45
CDH12P55289 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH12P55289 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CDH12P55289 PSMC1P4-201ENST00000515236 1327 ntBASIC5.98□□□□□ -1.45
CDH12P55289 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH12P55289 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CDH12P55289 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CDH12P55289 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH12P55289 SLC2A3P4-201ENST00000521259 1471 ntBASIC5.97□□□□□ -1.45
CDH12P55289 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH12P55289 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH12P55289 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms