Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.53□□□□□ -1.36
CDH6P55285 RPS27AP3-201ENST00000453803 454 ntBASIC6.53□□□□□ -1.36
CDH6P55285 AC004890.1-201ENST00000461005 181 ntBASIC6.53□□□□□ -1.36
CDH6P55285 NACAP5-201ENST00000509863 636 ntBASIC6.53□□□□□ -1.36
CDH6P55285 AC138517.1-201ENST00000515724 568 ntBASIC6.53□□□□□ -1.36
CDH6P55285 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.53□□□□□ -1.36
CDH6P55285 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.53□□□□□ -1.36
CDH6P55285 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.53□□□□□ -1.36
CDH6P55285 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.53□□□□□ -1.36
CDH6P55285 AC027229.1-201ENST00000583887 253 ntBASIC6.53□□□□□ -1.36
CDH6P55285 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.53□□□□□ -1.36
CDH6P55285 AL589765.6-201ENST00000601909 549 ntBASIC6.53□□□□□ -1.36
CDH6P55285 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CDH6P55285 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CDH6P55285 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CDH6P55285 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.36
CDH6P55285 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
CDH6P55285 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDH6P55285 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH6P55285 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDH6P55285 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH6P55285 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CDH6P55285 AL161901.1-201ENST00000624954 3425 ntBASIC6.52□□□□□ -1.37
CDH6P55285 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.52□□□□□ -1.37
CDH6P55285 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH6P55285 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH6P55285 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH6P55285 RNU6-316P-201ENST00000391027 107 ntBASIC6.52□□□□□ -1.37
CDH6P55285 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CDH6P55285 AL133260.1-201ENST00000405720 405 ntBASIC6.52□□□□□ -1.37
CDH6P55285 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.52□□□□□ -1.37
CDH6P55285 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
CDH6P55285 AC245291.3-201ENST00000443400 292 ntBASIC6.52□□□□□ -1.37
CDH6P55285 RANP2-201ENST00000456833 229 ntBASIC6.52□□□□□ -1.37
CDH6P55285 AL022319.1-201ENST00000458183 1167 ntBASIC6.52□□□□□ -1.37
CDH6P55285 MARK2P8-201ENST00000476069 952 ntBASIC6.52□□□□□ -1.37
CDH6P55285 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH6P55285 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH6P55285 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDH6P55285 AC093816.1-201ENST00000515076 913 ntBASIC6.52□□□□□ -1.37
CDH6P55285 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH6P55285 OR4A40P-201ENST00000533878 948 ntBASIC6.52□□□□□ -1.37
CDH6P55285 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH6P55285 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH6P55285 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH6P55285 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.52□□□□□ -1.37
CDH6P55285 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.52□□□□□ -1.37
CDH6P55285 SNORA74.4-201ENST00000607595 199 ntBASIC6.52□□□□□ -1.37
CDH6P55285 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH6P55285 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CDH6P55285 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH6P55285 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH6P55285 AL731532.1-201ENST00000623972 4236 ntBASIC6.52□□□□□ -1.37
CDH6P55285 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CDH6P55285 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.52□□□□□ -1.37
CDH6P55285 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CDH6P55285 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CDH6P55285 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CDH6P55285 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.51□□□□□ -1.37
CDH6P55285 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
CDH6P55285 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH6P55285 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
CDH6P55285 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CDH6P55285 AC092692.1-201ENST00000623625 2595 ntBASIC6.51□□□□□ -1.37
CDH6P55285 SNORA64.3-201ENST00000365647 134 ntBASIC6.51□□□□□ -1.37
CDH6P55285 AL360271.1-201ENST00000395679 510 ntBASIC6.51□□□□□ -1.37
CDH6P55285 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.51□□□□□ -1.37
CDH6P55285 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.51□□□□□ -1.37
CDH6P55285 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.51□□□□□ -1.37
CDH6P55285 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.51□□□□□ -1.37
CDH6P55285 NPM1P25-201ENST00000429734 854 ntBASIC6.51□□□□□ -1.37
CDH6P55285 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDH6P55285 MORF4-201ENST00000447135 971 ntBASIC6.51□□□□□ -1.37
CDH6P55285 AC073476.1-201ENST00000452854 407 ntBASIC6.51□□□□□ -1.37
CDH6P55285 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CDH6P55285 AC099670.1-201ENST00000455141 783 ntBASIC6.51□□□□□ -1.37
CDH6P55285 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.51□□□□□ -1.37
CDH6P55285 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.51□□□□□ -1.37
CDH6P55285 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
CDH6P55285 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.51□□□□□ -1.37
CDH6P55285 CYCSP25-201ENST00000525280 316 ntBASIC6.51□□□□□ -1.37
CDH6P55285 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.51□□□□□ -1.37
CDH6P55285 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.51□□□□□ -1.37
CDH6P55285 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.51□□□□□ -1.37
CDH6P55285 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.51□□□□□ -1.37
CDH6P55285 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.51□□□□□ -1.37
CDH6P55285 AC005479.3-201ENST00000602790 431 ntBASIC6.51□□□□□ -1.37
CDH6P55285 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.51□□□□□ -1.37
CDH6P55285 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.51□□□□□ -1.37
CDH6P55285 AC007603.3-201ENST00000636915 979 ntBASIC6.51□□□□□ -1.37
CDH6P55285 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH6P55285 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.51□□□□□ -1.37
CDH6P55285 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH6P55285 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.51□□□□□ -1.37
CDH6P55285 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH6P55285 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH6P55285 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.51□□□□□ -1.37
CDH6P55285 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CDH6P55285 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH6P55285 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms