Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
LIMK1P53667 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6.53□□□□□ -1.36
LIMK1P53667 HSPD1P9-201ENST00000420325 1636 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.53□□□□□ -1.36
LIMK1P53667 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LIMK1P53667 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
LIMK1P53667 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
LIMK1P53667 AL359195.2-201ENST00000623657 4412 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.53□□□□□ -1.36
LIMK1P53667 AC123769.1-201ENST00000530992 3192 ntBASIC6.53□□□□□ -1.36
LIMK1P53667 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.52□□□□□ -1.36
LIMK1P53667 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
LIMK1P53667 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 WBP11P1-201ENST00000562560 1931 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.52□□□□□ -1.37
LIMK1P53667 AC005702.3-201ENST00000585345 1447 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.52□□□□□ -1.37
LIMK1P53667 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK1P53667 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK1P53667 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
LIMK1P53667 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
LIMK1P53667 AC003045.1-201ENST00000398779 713 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
LIMK1P53667 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.52□□□□□ -1.37
LIMK1P53667 RPL17P17-201ENST00000419491 557 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC6.52□□□□□ -1.37
LIMK1P53667 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.52□□□□□ -1.37
LIMK1P53667 GAPDHP48-201ENST00000436626 961 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 AC010240.2-201ENST00000445363 1205 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 OR52H2P-201ENST00000514607 902 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK1P53667 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.52□□□□□ -1.37
LIMK1P53667 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.52□□□□□ -1.37
LIMK1P53667 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.52□□□□□ -1.37
LIMK1P53667 AC133552.4-201ENST00000576103 676 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.52□□□□□ -1.37
LIMK1P53667 AL035410.2-201ENST00000604963 864 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 SNORD96A-201ENST00000606577 79 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 AC073389.3-201ENST00000609434 935 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 AL354950.1-201ENST00000614150 568 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.52□□□□□ -1.37
LIMK1P53667 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.52□□□□□ -1.37
LIMK1P53667 AC127024.6-201ENST00000621598 424 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.52□□□□□ -1.37
LIMK1P53667 AC087821.1-201ENST00000623639 567 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
LIMK1P53667 CLCA3P-203ENST00000490028 2781 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
LIMK1P53667 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK1P53667 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK1P53667 AL391261.1-201ENST00000555712 1479 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.52□□□□□ -1.37
LIMK1P53667 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.52□□□□□ -1.37
LIMK1P53667 CDY5P-201ENST00000411487 1580 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 CDY9P-201ENST00000451397 1580 ntBASIC6.52□□□□□ -1.37
LIMK1P53667 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LIMK1P53667 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
LIMK1P53667 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LIMK1P53667 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 AC093225.1-201ENST00000506867 1408 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK1P53667 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.51□□□□□ -1.37
LIMK1P53667 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 MTHFD2P5-201ENST00000320415 844 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LIMK1P53667 AC087752.1-201ENST00000391360 558 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.51□□□□□ -1.37
LIMK1P53667 AL359694.1-201ENST00000403247 604 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.51□□□□□ -1.37
LIMK1P53667 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.51□□□□□ -1.37
LIMK1P53667 PSMC1P2-201ENST00000423961 1204 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.51□□□□□ -1.37
LIMK1P53667 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.51□□□□□ -1.37
LIMK1P53667 MTCO3P17-201ENST00000443775 513 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 PPIAP27-201ENST00000453800 265 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 AC083806.1-201ENST00000468934 316 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.51□□□□□ -1.37
LIMK1P53667 AC007998.1-201ENST00000474156 672 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 AC025458.1-201ENST00000506046 166 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LIMK1P53667 RNA5SP116-201ENST00000516132 98 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 AC073581.1-201ENST00000519036 575 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 AC022826.1-201ENST00000519383 805 ntBASIC6.51□□□□□ -1.37
LIMK1P53667 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.51□□□□□ -1.37
LIMK1P53667 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.51□□□□□ -1.37
LIMK1P53667 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.51□□□□□ -1.37
LIMK1P53667 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms