Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPAP53621 AL022323.4-201ENST00000623980 13120 ntBASIC6.85□□□□□ -1.31
COPAP53621 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.85□□□□□ -1.31
COPAP53621 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COPAP53621 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COPAP53621 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COPAP53621 RN7SKP187-201ENST00000365536 330 ntBASIC6.85□□□□□ -1.31
COPAP53621 OR6K3-202ENST00000368146 996 ntBASIC6.85□□□□□ -1.31
COPAP53621 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.85□□□□□ -1.31
COPAP53621 MIR7-1-201ENST00000384871 110 ntBASIC6.85□□□□□ -1.31
COPAP53621 VIM2P-201ENST00000402383 1294 ntBASIC6.85□□□□□ -1.31
COPAP53621 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
COPAP53621 KIF4CP-201ENST00000422742 1279 ntBASIC6.85□□□□□ -1.31
COPAP53621 GAPDHP57-201ENST00000424400 585 ntBASIC6.85□□□□□ -1.31
COPAP53621 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.85□□□□□ -1.31
COPAP53621 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COPAP53621 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
COPAP53621 MTCO3P43-201ENST00000440974 771 ntBASIC6.85□□□□□ -1.31
COPAP53621 PFN1P11-201ENST00000445829 389 ntBASIC6.85□□□□□ -1.31
COPAP53621 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.85□□□□□ -1.31
COPAP53621 C1DP3-201ENST00000455013 423 ntBASIC6.85□□□□□ -1.31
COPAP53621 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COPAP53621 AC005017.1-201ENST00000482002 490 ntBASIC6.85□□□□□ -1.31
COPAP53621 RN7SL187P-201ENST00000495587 303 ntBASIC6.85□□□□□ -1.31
COPAP53621 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COPAP53621 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.85□□□□□ -1.31
COPAP53621 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.85□□□□□ -1.31
COPAP53621 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.85□□□□□ -1.31
COPAP53621 OR8K2P-201ENST00000524645 927 ntBASIC6.85□□□□□ -1.31
COPAP53621 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.85□□□□□ -1.31
COPAP53621 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.85□□□□□ -1.31
COPAP53621 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.85□□□□□ -1.31
COPAP53621 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.85□□□□□ -1.31
COPAP53621 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.85□□□□□ -1.31
COPAP53621 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
COPAP53621 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.85□□□□□ -1.31
COPAP53621 AC067852.5-201ENST00000589299 310 ntBASIC6.85□□□□□ -1.31
COPAP53621 WBP1LP12-201ENST00000604449 331 ntBASIC6.85□□□□□ -1.31
COPAP53621 AP002371.2-201ENST00000624450 503 ntBASIC6.85□□□□□ -1.31
COPAP53621 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.85□□□□□ -1.31
COPAP53621 AP005139.1-201ENST00000580702 1647 ntBASIC6.85□□□□□ -1.31
COPAP53621 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.85□□□□□ -1.31
COPAP53621 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPAP53621 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.85□□□□□ -1.31
COPAP53621 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COPAP53621 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.85□□□□□ -1.31
COPAP53621 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COPAP53621 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COPAP53621 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.85□□□□□ -1.31
COPAP53621 BRAFP1-201ENST00000445336 2703 ntBASIC6.85□□□□□ -1.31
COPAP53621 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
COPAP53621 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
COPAP53621 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.84□□□□□ -1.31
COPAP53621 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.84□□□□□ -1.31
COPAP53621 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
COPAP53621 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COPAP53621 CASC19-255ENST00000641733 1385 ntBASIC6.84□□□□□ -1.31
COPAP53621 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
COPAP53621 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.84□□□□□ -1.31
COPAP53621 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.84□□□□□ -1.31
COPAP53621 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
COPAP53621 RNU6-883P-201ENST00000384597 107 ntBASIC6.84□□□□□ -1.31
COPAP53621 RPL9P21-201ENST00000392269 505 ntBASIC6.84□□□□□ -1.31
COPAP53621 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.84□□□□□ -1.31
COPAP53621 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.84□□□□□ -1.31
COPAP53621 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.84□□□□□ -1.31
COPAP53621 AL590623.1-201ENST00000427864 105 ntBASIC6.84□□□□□ -1.31
COPAP53621 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.84□□□□□ -1.31
COPAP53621 OR6R1P-201ENST00000431838 940 ntBASIC6.84□□□□□ -1.31
COPAP53621 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.84□□□□□ -1.31
COPAP53621 ARMC4P1-201ENST00000438905 707 ntBASIC6.84□□□□□ -1.31
COPAP53621 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.84□□□□□ -1.31
COPAP53621 ZNF736P11Y-201ENST00000442535 1213 ntBASIC6.84□□□□□ -1.31
COPAP53621 ZNF736P12Y-201ENST00000443152 1243 ntBASIC6.84□□□□□ -1.31
COPAP53621 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.84□□□□□ -1.31
COPAP53621 AC234771.2-201ENST00000445718 597 ntBASIC6.84□□□□□ -1.31
COPAP53621 AC073072.2-201ENST00000447425 348 ntBASIC6.84□□□□□ -1.31
COPAP53621 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
COPAP53621 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.84□□□□□ -1.31
COPAP53621 ZNF736P4Y-201ENST00000454995 1243 ntBASIC6.84□□□□□ -1.31
COPAP53621 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.84□□□□□ -1.31
COPAP53621 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.84□□□□□ -1.31
COPAP53621 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.84□□□□□ -1.31
COPAP53621 AC021269.1-201ENST00000526860 705 ntBASIC6.84□□□□□ -1.31
COPAP53621 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.84□□□□□ -1.31
COPAP53621 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.84□□□□□ -1.31
COPAP53621 AC121758.1-202ENST00000556917 658 ntBASIC6.84□□□□□ -1.31
COPAP53621 MT1CP-201ENST00000567054 174 ntBASIC6.84□□□□□ -1.31
COPAP53621 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.84□□□□□ -1.31
COPAP53621 AC020978.7-201ENST00000575953 1187 ntBASIC6.84□□□□□ -1.31
COPAP53621 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.84□□□□□ -1.31
COPAP53621 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.84□□□□□ -1.31
COPAP53621 AC012175.1-201ENST00000603755 531 ntBASIC6.84□□□□□ -1.31
COPAP53621 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.84□□□□□ -1.31
COPAP53621 WBP1LP8-201ENST00000617401 327 ntBASIC6.84□□□□□ -1.31
COPAP53621 AC089999.3-201ENST00000622440 577 ntBASIC6.84□□□□□ -1.31
COPAP53621 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.84□□□□□ -1.31
COPAP53621 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.84□□□□□ -1.31
COPAP53621 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.84□□□□□ -1.31
COPAP53621 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms