Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC025574.1-201ENST00000554784 1653 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.07□□□□□ -1.44
GTF2A1P52655 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
GTF2A1P52655 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
GTF2A1P52655 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
GTF2A1P52655 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.07□□□□□ -1.44
GTF2A1P52655 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
GTF2A1P52655 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GTF2A1P52655 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GTF2A1P52655 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GTF2A1P52655 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
GTF2A1P52655 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.07□□□□□ -1.44
GTF2A1P52655 AC106872.6-201ENST00000514228 1346 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GTF2A1P52655 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.07□□□□□ -1.44
GTF2A1P52655 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GTF2A1P52655 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GTF2A1P52655 OR5E1P-201ENST00000305754 927 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GTF2A1P52655 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
GTF2A1P52655 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GTF2A1P52655 SNORA51.7-201ENST00000384171 134 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 AC002524.1-201ENST00000411687 547 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC6.07□□□□□ -1.44
GTF2A1P52655 METTL15P3-201ENST00000415522 1221 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC6.07□□□□□ -1.44
GTF2A1P52655 CYP4F30P-202ENST00000420048 405 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 HBBP1-201ENST00000433329 439 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.07□□□□□ -1.44
GTF2A1P52655 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
GTF2A1P52655 TCEAL4P1-201ENST00000453620 588 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 CBX1P2-201ENST00000453841 458 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 RPL34P22-201ENST00000468193 318 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 GLUD1P3-202ENST00000508551 200 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 AC117383.2-201ENST00000514722 322 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 AL671862.1-201ENST00000515851 349 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 SCARNA6-201ENST00000515982 265 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.07□□□□□ -1.44
GTF2A1P52655 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.07□□□□□ -1.44
GTF2A1P52655 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.07□□□□□ -1.44
GTF2A1P52655 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.07□□□□□ -1.44
GTF2A1P52655 AC233290.1-201ENST00000553021 1186 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.07□□□□□ -1.44
GTF2A1P52655 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.07□□□□□ -1.44
GTF2A1P52655 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC6.07□□□□□ -1.44
GTF2A1P52655 AC233702.9-201ENST00000581528 203 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.07□□□□□ -1.44
GTF2A1P52655 uc_338.37-201ENST00000620113 186 ntBASIC6.07□□□□□ -1.44
GTF2A1P52655 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GTF2A1P52655 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.07□□□□□ -1.44
GTF2A1P52655 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
GTF2A1P52655 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.07□□□□□ -1.44
GTF2A1P52655 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.07□□□□□ -1.44
GTF2A1P52655 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
GTF2A1P52655 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2A1P52655 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2A1P52655 NEK2P2-201ENST00000438441 1338 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2A1P52655 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
GTF2A1P52655 AC083843.3-201ENST00000623679 2186 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2A1P52655 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.06□□□□□ -1.44
GTF2A1P52655 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2A1P52655 RN7SKP185-201ENST00000362813 326 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 RNU6-249P-201ENST00000363016 102 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 SNORD94-201ENST00000386037 137 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 GPS2P1-201ENST00000411761 986 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.06□□□□□ -1.44
GTF2A1P52655 AC113412.1-201ENST00000425840 504 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.06□□□□□ -1.44
GTF2A1P52655 AC012512.1-201ENST00000446594 718 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.06□□□□□ -1.44
GTF2A1P52655 SEPT7P3-201ENST00000455017 621 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 RN7SL392P-201ENST00000473024 299 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 CHCHD2P7-201ENST00000508008 452 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC6.06□□□□□ -1.44
GTF2A1P52655 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC6.06□□□□□ -1.44
GTF2A1P52655 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.06□□□□□ -1.44
GTF2A1P52655 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
GTF2A1P52655 OR4F28P-201ENST00000559128 938 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.06□□□□□ -1.44
GTF2A1P52655 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.06□□□□□ -1.44
GTF2A1P52655 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2A1P52655 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2A1P52655 OR4F8P-201ENST00000589943 937 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.06□□□□□ -1.44
GTF2A1P52655 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC6.06□□□□□ -1.44
GTF2A1P52655 AC027334.1-201ENST00000603257 310 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 RN7SL778P-201ENST00000607160 297 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.06□□□□□ -1.44
GTF2A1P52655 AC002094.5-201ENST00000623773 629 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 OR7E161P-202ENST00000641994 1033 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2A1P52655 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2A1P52655 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2A1P52655 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
GTF2A1P52655 CDY19P-201ENST00000411668 1613 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 CDY18P-201ENST00000438294 1609 ntBASIC6.06□□□□□ -1.44
GTF2A1P52655 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms