Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-1P43699 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-1P43699 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-1P43699 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NKX2-1P43699 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NKX2-1P43699 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-1P43699 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-1P43699 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-1P43699 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-1P43699 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NKX2-1P43699 HSP90AA2P-201ENST00000530115 2196 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NKX2-1P43699 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-1P43699 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-1P43699 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NKX2-1P43699 AC226101.1-201ENST00000401483 387 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 RPSAP44-201ENST00000406712 884 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 RNU2-5P-201ENST00000410533 180 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 NME1P1-201ENST00000420914 382 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 SNRPEP5-201ENST00000425442 278 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 AC134879.1-201ENST00000426062 394 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-1P43699 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-1P43699 AL590128.1-201ENST00000433407 286 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 AC003989.1-201ENST00000434569 565 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 PHBP4-201ENST00000437447 837 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 CR391992.1-201ENST00000438601 394 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 AL390879.1-201ENST00000439143 386 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.28□□□□□ -1.56
NKX2-1P43699 AC114878.1-201ENST00000441166 358 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 PRKAR1AP1-201ENST00000441422 1162 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-1P43699 PCMTD1P3-201ENST00000451824 472 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 TPRKBP1-201ENST00000456243 481 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 AL096803.1-201ENST00000456921 1021 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 RN7SL654P-201ENST00000479178 292 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.28□□□□□ -1.56
NKX2-1P43699 MTCYBP44-201ENST00000514835 823 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 AC104997.1-201ENST00000519761 717 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-1P43699 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-1P43699 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-1P43699 AC023245.2-201ENST00000530760 2978 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 HNRNPCP1-201ENST00000556181 766 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NKX2-1P43699 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.28□□□□□ -1.56
NKX2-1P43699 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-1P43699 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.28□□□□□ -1.56
NKX2-1P43699 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.28□□□□□ -1.56
NKX2-1P43699 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-1P43699 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-1P43699 FRG2MP-201ENST00000613317 856 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 AC116165.3-201ENST00000614524 400 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 AC003001.2-201ENST00000616294 831 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 AC018692.2-201ENST00000624130 348 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NKX2-1P43699 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NKX2-1P43699 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.28□□□□□ -1.56
NKX2-1P43699 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.28□□□□□ -1.56
NKX2-1P43699 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NKX2-1P43699 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
NKX2-1P43699 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 AC093297.3-201ENST00000607056 2517 ntBASIC5.28□□□□□ -1.56
NKX2-1P43699 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NKX2-1P43699 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-1P43699 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-1P43699 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
NKX2-1P43699 AC011455.2-201ENST00000599320 3336 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-1P43699 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NKX2-1P43699 RNA5SP478-201ENST00000364657 115 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-1P43699 RNA5SP280-201ENST00000411230 115 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 AL356968.2-201ENST00000412769 1257 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 UBE2V1P14-201ENST00000415815 558 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 CYP4F30P-202ENST00000420048 405 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
NKX2-1P43699 AC021876.1-201ENST00000425959 359 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-1P43699 AL138787.1-202ENST00000437804 898 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms