Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
PTPN9P43378 GTF3AP6-201ENST00000432585 986 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.66□□□□□ -1.34
PTPN9P43378 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.66□□□□□ -1.34
PTPN9P43378 AL451063.1-201ENST00000450164 1133 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 CEACAMP11-201ENST00000455211 583 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 SNRPCP11-201ENST00000492453 205 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC6.66□□□□□ -1.34
PTPN9P43378 IGHV4-55-201ENST00000520889 368 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.66□□□□□ -1.34
PTPN9P43378 AC124891.1-201ENST00000536322 519 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 TDGP1-201ENST00000543961 1229 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 AC009729.1-201ENST00000548873 1133 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.66□□□□□ -1.34
PTPN9P43378 AC009120.3-201ENST00000563335 499 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.66□□□□□ -1.34
PTPN9P43378 MIR744-201ENST00000578242 98 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 RN7SL66P-201ENST00000582099 264 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.66□□□□□ -1.34
PTPN9P43378 AL021368.1-201ENST00000607490 540 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.66□□□□□ -1.34
PTPN9P43378 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PTPN9P43378 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PTPN9P43378 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.66□□□□□ -1.34
PTPN9P43378 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTPN9P43378 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PTPN9P43378 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
PTPN9P43378 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.66□□□□□ -1.34
PTPN9P43378 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PTPN9P43378 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.66□□□□□ -1.34
PTPN9P43378 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTPN9P43378 AL136984.1-201ENST00000607611 1893 ntBASIC6.66□□□□□ -1.34
PTPN9P43378 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTPN9P43378 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
PTPN9P43378 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.66□□□□□ -1.34
PTPN9P43378 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PTPN9P43378 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
PTPN9P43378 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTPN9P43378 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.65□□□□□ -1.34
PTPN9P43378 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
PTPN9P43378 AC022034.1-201ENST00000512867 2156 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
PTPN9P43378 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTPN9P43378 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
PTPN9P43378 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTPN9P43378 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.65□□□□□ -1.34
PTPN9P43378 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PTPN9P43378 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.65□□□□□ -1.34
PTPN9P43378 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PTPN9P43378 FUNDC2P3-201ENST00000334716 533 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 RNA5SP478-201ENST00000364657 115 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTPN9P43378 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.65□□□□□ -1.34
PTPN9P43378 AL133260.1-201ENST00000405720 405 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 RN7SKP161-201ENST00000411110 305 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.65□□□□□ -1.34
PTPN9P43378 UBE2V1P14-201ENST00000415815 558 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 AL360013.1-201ENST00000419031 858 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
PTPN9P43378 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.65□□□□□ -1.34
PTPN9P43378 RN7SL643P-201ENST00000471845 291 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 AC147055.1-201ENST00000509261 750 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 NACAP5-201ENST00000509863 636 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.65□□□□□ -1.34
PTPN9P43378 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.65□□□□□ -1.34
PTPN9P43378 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTPN9P43378 RNA5SP418-201ENST00000515951 117 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.65□□□□□ -1.34
PTPN9P43378 AC110056.1-201ENST00000525759 911 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PTPN9P43378 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
PTPN9P43378 AC078878.1-201ENST00000539832 958 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 AC008055.1-201ENST00000547032 609 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.65□□□□□ -1.34
PTPN9P43378 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.65□□□□□ -1.34
PTPN9P43378 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.65□□□□□ -1.34
PTPN9P43378 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.65□□□□□ -1.34
PTPN9P43378 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTPN9P43378 AL133406.3-201ENST00000606817 541 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 AC012467.1-201ENST00000607740 256 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 AC073389.3-201ENST00000609434 935 ntBASIC6.65□□□□□ -1.34
PTPN9P43378 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.65□□□□□ -1.34
PTPN9P43378 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PTPN9P43378 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.35
PTPN9P43378 AC011815.2-201ENST00000618230 2021 ntBASIC6.65□□□□□ -1.35
PTPN9P43378 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.65□□□□□ -1.35
PTPN9P43378 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
PTPN9P43378 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
PTPN9P43378 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PTPN9P43378 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.65□□□□□ -1.35
PTPN9P43378 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
PTPN9P43378 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.65□□□□□ -1.35
PTPN9P43378 AC011369.2-201ENST00000624423 1567 ntBASIC6.65□□□□□ -1.35
PTPN9P43378 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.65□□□□□ -1.35
PTPN9P43378 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PTPN9P43378 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PTPN9P43378 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.65□□□□□ -1.35
PTPN9P43378 AC034229.2-201ENST00000566945 2508 ntBASIC6.65□□□□□ -1.35
PTPN9P43378 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms