Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCD3P28288 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
ABCD3P28288 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ABCD3P28288 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
ABCD3P28288 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.13□□□□□ -1.43
ABCD3P28288 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.13□□□□□ -1.43
ABCD3P28288 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCD3P28288 MTND4LP14-201ENST00000429447 288 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCD3P28288 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.13□□□□□ -1.43
ABCD3P28288 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 SEPT14P12-201ENST00000442280 560 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 RPS15AP29-201ENST00000445539 400 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCD3P28288 AL034369.1-201ENST00000453808 477 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 RN7SL502P-201ENST00000481857 290 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCD3P28288 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCD3P28288 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCD3P28288 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCD3P28288 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCD3P28288 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.13□□□□□ -1.43
ABCD3P28288 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCD3P28288 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.13□□□□□ -1.43
ABCD3P28288 AP003115.1-201ENST00000569849 463 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.13□□□□□ -1.43
ABCD3P28288 AC024267.2-201ENST00000582737 417 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.13□□□□□ -1.43
ABCD3P28288 RPL29P33-201ENST00000587474 316 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.13□□□□□ -1.43
ABCD3P28288 AC012175.1-201ENST00000603755 531 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 AC004241.2-201ENST00000614562 444 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 AL138693.1-201ENST00000622219 129 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.13□□□□□ -1.43
ABCD3P28288 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.13□□□□□ -1.43
ABCD3P28288 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.13□□□□□ -1.43
ABCD3P28288 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.13□□□□□ -1.43
ABCD3P28288 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
ABCD3P28288 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ABCD3P28288 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ABCD3P28288 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
ABCD3P28288 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCD3P28288 AL356317.1-201ENST00000396110 1436 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 RBPJP6-201ENST00000411556 1431 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 FANCD2P2-201ENST00000437591 1400 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.13□□□□□ -1.43
ABCD3P28288 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
ABCD3P28288 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCD3P28288 CCAT2-201ENST00000630920 1752 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.13□□□□□ -1.43
ABCD3P28288 AC105114.1-201ENST00000624795 1862 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCD3P28288 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCD3P28288 AC105749.1-201ENST00000631338 2008 ntBASIC6.13□□□□□ -1.43
ABCD3P28288 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
ABCD3P28288 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 MAPK10-344ENST00000641718 3746 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
ABCD3P28288 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 PPIAP24-201ENST00000328558 471 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
ABCD3P28288 SNORA27.3-201ENST00000364937 134 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.12□□□□□ -1.43
ABCD3P28288 SNORD94-201ENST00000386037 137 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
ABCD3P28288 AL929472.1-201ENST00000417484 429 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.12□□□□□ -1.43
ABCD3P28288 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCD3P28288 AL589794.1-201ENST00000424971 390 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 MTND5P23-201ENST00000430812 1655 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 PA2G4P1-201ENST00000442248 1197 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 GAPDHP33-201ENST00000443168 1013 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 SULT1D1P-201ENST00000458020 882 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.12□□□□□ -1.43
ABCD3P28288 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 AC104629.2-201ENST00000468627 598 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.12□□□□□ -1.43
ABCD3P28288 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCD3P28288 AC114324.2-202ENST00000503812 134 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCD3P28288 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.12□□□□□ -1.43
ABCD3P28288 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC6.12□□□□□ -1.43
ABCD3P28288 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.12□□□□□ -1.43
ABCD3P28288 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCD3P28288 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.12□□□□□ -1.43
ABCD3P28288 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.12□□□□□ -1.43
ABCD3P28288 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.12□□□□□ -1.43
ABCD3P28288 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
ABCD3P28288 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms