Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 ANP32BP1-202ENST00000568553 737 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC016839.1-201ENST00000578162 867 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC107993.1-201ENST00000591343 684 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 FRG2MP-201ENST00000613317 856 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 pRNA.9-201ENST00000618609 89 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC133485.6-201ENST00000624045 688 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 FKBP1AP4-201ENST00000631775 336 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC099654.11-201ENST00000638857 294 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC011416.1-201ENST00000514947 1732 ntBASIC5.42□□□□□ -1.54
HLA-DMAP28067 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-DMAP28067 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
HLA-DMAP28067 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DMAP28067 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DMAP28067 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DMAP28067 AP001284.1-201ENST00000528393 2118 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DMAP28067 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DMAP28067 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DMAP28067 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DMAP28067 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 SNX18P13-201ENST00000412442 529 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DMAP28067 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 IGLV3-4-201ENST00000432300 244 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 RPL14P5-201ENST00000436474 730 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 MTND2P40-201ENST00000436718 841 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 PRKAR1AP1-201ENST00000441422 1162 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 AL161722.1-201ENST00000446972 1032 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 OR7E7P-201ENST00000455678 1012 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 AC079193.1-201ENST00000460497 588 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 RN7SL492P-201ENST00000460700 295 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 snoU109.5-201ENST00000516231 132 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 IGKV1D-22-201ENST00000518953 324 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 AP001646.2-201ENST00000528645 1156 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 AL049779.3-201ENST00000557141 606 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 FRG2IP-201ENST00000563581 781 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 AC009962.1-201ENST00000567327 3813 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 AP005328.1-201ENST00000577719 681 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 MIR1273F-201ENST00000580581 99 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 AC060780.2-201ENST00000589047 198 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 AC007671.1-201ENST00000616957 830 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 AC010320.5-201ENST00000619124 676 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DMAP28067 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DMAP28067 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HLA-DMAP28067 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.41□□□□□ -1.54
HLA-DMAP28067 TRIM53CP-201ENST00000531490 1354 ntBASIC5.41□□□□□ -1.54
HLA-DMAP28067 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DMAP28067 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DMAP28067 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DMAP28067 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DMAP28067 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DMAP28067 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DMAP28067 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DMAP28067 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DMAP28067 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.4□□□□□ -1.54
HLA-DMAP28067 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HLA-DMAP28067 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HLA-DMAP28067 RN7SKP189-201ENST00000365042 330 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms